PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn371851
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 164aa    MW: 18077.1 Da    PI: 6.3432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn371851genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.5e-162574255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr +k +g+Wv+eIr+p   g +  r +lg++ t++ Aa a++ a  +l+g
  Achn371851 25 KYKGVRCRK-WGKWVSEIRVP---G-TqDRLWLGSYTTPQAAAVAHDIASYCLRG 74
                8*****777.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.8E-252590IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-242585IPR001471AP2/ERF domain
PROSITE profilePS5103220.7452584IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-172584IPR016177DNA-binding domain
PfamPF008473.7E-82574IPR001471AP2/ERF domain
CDDcd000181.06E-242584No hitNo description
PRINTSPR003674.0E-72637IPR001471AP2/ERF domain
PRINTSPR003674.0E-74864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MNSCISDESE SSRGGDHDQQ QKMIKYKGVR CRKWGKWVSE IRVPGTQDRL WLGSYTTPQA  60
AAVAHDIASY CLRGPSSLDN LNFPLTTLPA SVRTNMSPRS IQKAASDAGM AVDAQFAINQ  120
QNPTPNYENN TLHGVGHIWE TSGHDPQMIR QGEDLNISVE DYL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028064966.16e-59ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I81e-41ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2R6Q1921e-120A0A2R6Q192_ACTCH; Ethylene-responsive transcription factor
STRINGPOPTR_0019s10220.11e-53(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.15e-44ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]