PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn369371

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

G2-like

Protein Properties

Length: 325aa MW: 36387.1 Da PI: 5.9872

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn369371	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.6	4.9e-12	221	250	1	30
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPk 30 k+r+rWt++LH+rFve+v++LGG+e+ k Achn369371 221 KTRIRWTQDLHDRFVECVNRLGGPERKSEK 250 68**********************986655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.9E-9	220	251	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-7	221	264	IPR006447	Myb domain, plants
Pfam	PF14379	6.8E-20	261	308	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MATQKLSYDF GKQFTRNGGN WNGNGNGNSH FFGTQPQLEN LMGILIPSPN TGREFGSLEK 60 NWDQASSSTT ILSRIGSPIS AFYATEKYMG FPQFDFPSGI GNSDFQTPPY QPPGDRFCFE 120 KPEESGLKSH FSSGQNYGSD HEKSGQVQGN DFLEREKILQ LKRKLLDDFD TSDRNQDVSV 180 NQNLYNSQLE HMRQSGGPSA GGVVSVNSSN SVPSGAALAS KTRIRWTQDL HDRFVECVNR 240 LGGPERKSEK KANMNDATSG MQIKEALQLQ LDVQRQLHEQ LEIQRNLQLR IEEQGRQLRQ 300 MFDQQQNTNK NLFEMESSSL ALSD*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019247775.1	2e-70	PREDICTED: myb family transcription factor PHL5-like
TrEMBL	A0A2R6P371	0.0	A0A2R6P371_ACTCH; Myb family transcription factor
STRING	XP_009801945.1	2e-64	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2491	24	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	2e-32	G2-like family protein