PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn368611
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family CPP
Protein Properties Length: 1467aa    MW: 162983 Da    PI: 7.4932
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn368611genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR48.12.4e-15759798140
         TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                 k++kgC+Ckk+ ClkkYCeCf+a+  Cse+CkC dCkN e
  Achn368611 759 KHNKGCKCKKTGCLKKYCECFQANILCSENCKCMDCKNFE 798
                 589***********************************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561763.64E-1221132IPR016166FAD-binding, type 2
PfamPF015656.5E-635124IPR006094FAD linked oxidase, N-terminal
SuperFamilySSF561763.46E-12222334IPR016166FAD-binding, type 2
PfamPF015656.5E-6237326IPR006094FAD linked oxidase, N-terminal
TIGRFAMsTIGR016774.2E-121337607IPR010030L-gulonolactone oxidase, plant
PfamPF040302.8E-13500598IPR007173D-arabinono-1,4-lactone oxidase
PROSITE profilePS5163430.26680799IPR005172CRC domain
SMARTSM011140.038684714IPR033467Tesmin/TSO1-like CXC domain
SMARTSM011142.9E-18759800IPR033467Tesmin/TSO1-like CXC domain
PfamPF036389.1E-12762797IPR005172CRC domain
Gene3DG3DSA:3.40.50.18202.0E-3312241466IPR029058Alpha/Beta hydrolase fold
SuperFamilySSF534741.39E-2312281359IPR029058Alpha/Beta hydrolase fold
PfamPF003265.6E-612551415IPR001375Peptidase S9, prolyl oligopeptidase, catalytic domain
SuperFamilySSF534741.39E-2313901466IPR029058Alpha/Beta hydrolase fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006508Biological Processproteolysis
GO:0055114Biological Processoxidation-reduction process
GO:0016020Cellular Componentmembrane
GO:0003885Molecular FunctionD-arabinono-1,4-lactone oxidase activity
GO:0008236Molecular Functionserine-type peptidase activity
GO:0050660Molecular Functionflavin adenine dinucleotide binding
Sequence ? help Back to Top
Protein Sequence    Length: 1467 aa     Download sequence    Send to blast
MPPPPPVQCN QTGCTLYNSY GVWPDRTPCS VPTTLYPTTE EELLLAVATA AKNNLKVKVV  60
TKFSHTIPKL ACPATNSGNS IFLSTMNYNS EIAVDAANLA VTADSGAGLR DVIDAVEAAG  120
LSLVAAPYWE GVSVDDDGIE DKFGEHAKSH EFADITWYPS KHEAVYRYDD RVPLSTVGDG  180
VNDFLGFQSN SILISKSTRA TAMPPPPPVQ CNQTGCTLYN SYGVWPDRTP CSVPTTLYPT  240
TEEELLLAVA TAAKNNLKVK VVTKFSHTIP KLACPATNSG NSIFLSTMNY NSEIAVDAAN  300
LAVTADSGAG LRDVIDAVEA AGLSLVAAPY WEGVSVDDDG IEDKFGEHAK SHEFADITWY  360
PSKHEAVYRY DDRVPLSTVG DGVNDFLGFQ SNSILISKST RATGYKKLIA NGLKNNRLIF  420
TGYPVVGHQG KMQTSGSCLY SPSRRIDTSC AWDPRINGLF FYESTAIFPA QKFRDFILDV  480
KRLRDLNPES FCGVDIYNGL LIRCIKASKA YLGQTEDSVV VDFNYYRADE ASTPRLNQDV  540
WEEVEQMAFF KYEAKPHWAK NRNLAFLVVN KKYVNFNKFV QAKNKLDPRN VFSGEWSDEI  600
LYGKKGGVLA DGHDKLDAKF GKKICFAKRD IMERRLLSAH VTFLNLTAVE QPSLTECQPS  660
NATLQFSPSD QSLPHPTVRL YSKLNFKKGY CECFSLGIYC YCCNCTNCHN NVEHDATRQE  720
AIGATLERNP NAFRPKILNS PRGSRDAKEN AGEIPGLAKH NKGCKCKKTG CLKKYCECFQ  780
ANILCSENCK CMDCKNFEGS EERTALVHAD HGNYISYLQQ VANAAINGAI GTSHLGTLRA  840
SKKRKNELLI FGAMASDQPL HWIAQFPQGI GSVCCQSSDC LVHKTYKRFS QLILYQLPYA  900
AKDKMDKQGV QLEGSIVSSA PDKYRQMEDN TQKSIPEDRL SVNQVVKADD SGSDESDAQT  960
RRPLSPATLA LMFAEHDAMP VETGSPDAAA NCNGTMTCKS SQGQIATKLY AEQERIVLTK  1020
FWDFLNRIVT CRSIKGEEPK PNQASHKNQR RTVSRVPKLN QVTRSPTKRF VKAVDQVVTE  1080
TPFSSSVHNK YYWSPMSVSN KQTTSVSTDR KMESIDAAKL RSDFVHVLRS RRSPEIPLSV  1140
ELGKPVADPL YQETPQPRFR EAMQSCPKAD IPNLKDLLKE ENFYLITEFF TPTCLLILSI  1200
KGTFCIHKQS GEQGRLPVLI LSMKESNHQK RQAVVFLHST NKCKEWLRPL LEAYASRGYV  1260
AVAIDSRYHG ERASTKTTYR DALVSSWKKC DTMPFLFDTV WDLIKLADHL TQREDIDPLR  1320
IGITGESLGG MHAWFAAAAD TRYAVAAPII GVQGFQWAID HDKWQARVES IKAVFEEART  1380
DLGKSEIDKE VVEKDVIGTK FYFGQTGEND PRCPFGGLEI PISRACKAYE EAHCLDSFKV  1440
IAEPGIGHKM TSSMVKEASD WFDRFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-2968880823132Protein lin-54 homolog
5fd3_B2e-2968880823132Protein lin-54 homolog
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-61Tesmin/TSO1-like CXC domain-containing protein