PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn353161
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 376aa    MW: 41861.9 Da    PI: 7.832
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn353161genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like67.91.7e-21130178554
     G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                 +Wt+eLH++F+ av++L G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  Achn353161 130 EWTEELHNKFMAAVNHL-GEGRCYPKEILELMNVPGLTRMQVASHLQKCR 178
                 7****************.9*****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011010.96145IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23004.3E-5664No hitNo description
PROSITE profilePS5129412.202123182IPR017930Myb domain
SuperFamilySSF466897.62E-17124178IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-21124179IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-19129179IPR006447Myb domain, plants
PfamPF002494.9E-7130177IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MISTEVMSAD EDAMVAKIAL ENGACFFLEK PVGANVLKSL WQYVIKEKLF KVKIFENNDN  60
LHETANLNGT KVHKSTKNNP KGNNETNSNY RKSNDVVKKK WRNGKGNNVD ELVGECNKGN  120
RISSKKFGTE WTEELHNKFM AAVNHLGEGR CYPKEILELM NVPGLTRMQV ASHLQKCRND  180
NWRAPETRKS TNASSAPTNV SQYKFASRKF GSMPRLVKSS NNPKVSRLQE TWENHTMQLT  240
HSQTHMVPNC VGANLVPHDS STQSNVGQQR ANGSNQVMYN GDYVNVASTG DENLATLLEM  300
TGPNQNSQSV LSYFGNATFG AESHNISSNQ ASIPDDFFDF VPEMEGSQCF TKLLGGFPEA  360
CTFDVEPIFF DQVRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-15123178257ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028104648.11e-115two-component response regulator ORR24-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.23e-24response regulator 1