PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn352951
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 271aa    MW: 29450.7 Da    PI: 8.668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn352951genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-202575256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Achn352951 25 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 75
                589******.7*********43...36**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.82E-312582No hitNo description
PROSITE profilePS5103220.5342582IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-282582IPR001471AP2/ERF domain
PfamPF008473.1E-152575IPR001471AP2/ERF domain
SMARTSM003802.5E-362588IPR001471AP2/ERF domain
PRINTSPR003672.5E-72637IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-202682IPR016177DNA-binding domain
PRINTSPR003672.5E-74864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MVGSQPTTAT TATTVVQRTQ PIVRRFVGVR QRPSGRWVAE IKDSSQRVRL WLGTYDTPEE  60
AARAYDEAAR ALRGENARTN FALVNPSLSH QLGNSSPSNG GHGLSFSSLK AKLSKNLQSI  120
MARSSDNNKS CKSRVSDQFT FASIFHFRGN YDQYQKSPFD MRGIEKVVQP SIIVPPVAAV  180
AAAEEGWESS SVSDCSSEWF RQHGLDSDGS DIGDPFVGDQ MMGYQWMDSP EIGGDGGGAE  240
VLRSKRFKVS SSVVVPPTFS ESPYNGNSLK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1425811471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028103385.11e-122ethylene-responsive transcription factor CRF4-like
TrEMBLA0A2R6QS841e-177A0A2R6QS84_ACTCH; Ethylene-responsive transcription factor RAP2-11 like
STRINGPOPTR_0014s07280.11e-108(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16related to AP2 11