PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn345751
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family BES1
Protein Properties Length: 331aa    MW: 35205 Da    PI: 7.0326
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn345751genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.25.3e-6521501146
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 ++++r ptwkErEnnkrRERrRRaiaakiyaGLR++Gn++lpk++DnneVlkALcreAGw+ve+DGttyrkg+kp e+++++g sasasp+ss+q+s+ 
  Achn345751   2 TSGTRLPTWKERENNKRRERRRRAIAAKIYAGLRMYGNFQLPKHCDNNEVLKALCREAGWIVEEDGTTYRKGCKPVERMDIIGGSASASPCSSYQQSPC 100
                 5899*******************************************************************************************7777 PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslv 146
                 +s+ +sp +s  +sp ss++ +++ ++ +++ s+   +sl+p+l++ls++
  Achn345751 101 ASYNPSPPSSAIPSPVSSHYAANTISNVANTISNadpNSLIPWLKNLSSS 150
                 7777777777777777777666665554443333677999***9999764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.5E-663148IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNF QLPKHCDNNE VLKALCREAG  60
WIVEEDGTTY RKGCKPVERM DIIGGSASAS PCSSYQQSPC ASYNPSPPSS AIPSPVSSHY  120
AANTISNVAN TISNADPNSL IPWLKNLSSS GSFKFHHHLF MHGGSISAPV TPPVSSPTAQ  180
TPRINDTWED SAGNAAWAGQ HHPFAPSSTP PSPGRQTPPD SGWLSGTQTP QDGPSSPMFS  240
LVSSNPFGFH EALSGGGSRM WTPGQSGTCS PAIAAGCDQT ADVPMSDSMA AEFAFGSNTV  300
GVVKAWEGER IHEECVADDL ELTLGNSGTR *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028072793.11e-172BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_028072795.11e-172BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2R6PY380.0A0A2R6PY38_ACTCH; BES1/BZR1 protein
STRINGXP_009352718.11e-164(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-105BES1/BZR1 homolog 4