PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn344311
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 240aa    MW: 26739.4 Da    PI: 8.7791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn344311genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.8e-152271255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d s   ++ r +lg+++ aeeAa a++ a++ l+g
  Achn344311 22 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTYDRAEEAAVAYDSAARLLRG 71
                577******.7*********42...36***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.37E-292178No hitNo description
SMARTSM003801.8E-302285IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-262279IPR001471AP2/ERF domain
PROSITE profilePS5103219.3882279IPR001471AP2/ERF domain
PRINTSPR003672.1E-62334IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-192380IPR016177DNA-binding domain
PfamPF008472.1E-92571IPR001471AP2/ERF domain
PRINTSPR003672.1E-64561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSLETQNLNE NGEKRSLKLP KRFLGVRQRP SGRWVAEIKD SSQKLRLWLG TYDRAEEAAV  60
AYDSAARLLR GRNAKTNFTY NGIMTTHQEN NNLFGKNPRL YRLLQHAIMK NLAKSSSLNS  120
ANLEADSNFG GVVEETIVCS IDKDHNQLCS LSLGSSRVYS SVIVAPSFSA SPSCREGQQL  180
DESMKIVCRN WMKEMEDEAA TLIEIQAKVE KEMGSAQGFV SVYTYKKVCI PDLCVKNSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028106804.17e-81ethylene-responsive transcription factor ERN1-like
TrEMBLA0A2R6PRP91e-134A0A2R6PRP9_ACTCH; Ethylene-responsive transcription factor RAP2-11 like
STRINGVIT_17s0000g04480.t011e-69(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-17related to AP2 11