PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn343181 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | Nin-like | ||||||||
Protein Properties | Length: 1289aa MW: 145786 Da PI: 8.3791 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 90.3 | 1.5e-28 | 987 | 1038 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l++yFs+++kdAAk+L vc+T+LKriCRq+GIkRWP+Rkik++ Achn343181 987 AEKTITLQTLRQYFSGSLKDAAKSLRVCPTTLKRICRQHGIKRWPSRKIKKV 1038 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.180.10 | 3.4E-172 | 19 | 371 | IPR011614 | Catalase core domain |
SuperFamily | SSF56634 | 2.09E-195 | 19 | 476 | IPR020835 | Catalase-like domain |
PROSITE profile | PS51402 | 70.499 | 22 | 495 | IPR018028 | Catalase, mono-functional, haem-containing |
CDD | cd08154 | 0 | 24 | 480 | No hit | No description |
SMART | SM01060 | 4.9E-239 | 26 | 404 | IPR011614 | Catalase core domain |
Pfam | PF00199 | 1.5E-166 | 26 | 401 | IPR011614 | Catalase core domain |
PRINTS | PR00067 | 1.4E-65 | 34 | 57 | IPR018028 | Catalase, mono-functional, haem-containing |
PROSITE pattern | PS00438 | 0 | 57 | 73 | IPR024708 | Catalase active site |
PRINTS | PR00067 | 1.4E-65 | 97 | 115 | IPR018028 | Catalase, mono-functional, haem-containing |
PRINTS | PR00067 | 1.4E-65 | 118 | 135 | IPR018028 | Catalase, mono-functional, haem-containing |
PRINTS | PR00067 | 1.4E-65 | 137 | 155 | IPR018028 | Catalase, mono-functional, haem-containing |
PRINTS | PR00067 | 1.4E-65 | 302 | 329 | IPR018028 | Catalase, mono-functional, haem-containing |
PRINTS | PR00067 | 1.4E-65 | 334 | 360 | IPR018028 | Catalase, mono-functional, haem-containing |
PROSITE pattern | PS00437 | 0 | 347 | 355 | IPR002226 | Catalase haem-binding site |
Pfam | PF06628 | 5.7E-10 | 426 | 476 | IPR010582 | Catalase immune-responsive domain |
PROSITE profile | PS51519 | 16.79 | 975 | 1058 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 6.2E-26 | 990 | 1038 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 5.4E-23 | 1182 | 1277 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 4.8E-23 | 1187 | 1272 | No hit | No description |
SMART | SM00666 | 3.3E-25 | 1190 | 1273 | IPR000270 | PB1 domain |
PROSITE profile | PS51745 | 24.237 | 1190 | 1273 | IPR000270 | PB1 domain |
Pfam | PF00564 | 8.4E-18 | 1191 | 1272 | IPR000270 | PB1 domain |
CDD | cd06407 | 8.97E-38 | 1191 | 1272 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006979 | Biological Process | response to oxidative stress | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0004096 | Molecular Function | catalase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0020037 | Molecular Function | heme binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1289 aa Download sequence Send to blast |
MEVVKSGGGD WAALLPSSAN DSPFWTTNSG APVWNNNSSM TVGTREHYHL LEKLANFDRE 60 RIPERVVHAR GASAKGIFEV THNISHLTFA NFLRAPGVQT PVIVRFSTVI HERGSPETLR 120 DPRGFAVKFY TKEGNFDLVG NNFPVFFIRD GMKFPDMVHA LKPNPKSHIQ ENWRILDFFS 180 HHPESLHMFT FLFDDVGIPQ DYRHMEGFGV NTYTFISKAG KVHFVKFHWK PTCGVRSLLE 240 DEAIKVGGSD HSHATRDLYD SIAAGNYPEW KLFIQTIDPD HEDKLDFDPL DATKIWPEDI 300 FPLQPVGRMV LNKNIDNFFA ENEQLAFCPA IVVPGIYYSD DKLLQTRIFS YADTQRYRIG 360 ANYLQLPANA PKCIYHNNHH DGAMNFMHRD EEVNYFPSRF DPVREAKKYP IPSNVLMGRR 420 EKRVIEKENN FKQPGERYRS WAPDRRERFI SRWIEALSDP RLTHEIRSIW ISYWSQECPR 480 IQESSCFEAS NGEPSVNSLQ NNAQQERQRS SFPENLTTSE PQVQNLTKTS SPSHNLLDLS 540 GCSDLSGRFW IGPKANSGPG SSVMDRLIRA LGYIKDSTRN KDALIQLWVP VNSGGRRFLT 600 TNDQPFFLDF NSPGLASYRD ISVNYQFPTE ENSKEIVGLP GRVFKGKVPE WSPDVRFFRN 660 DEFARVDHAQ QCGIRGTLAL PVFEQGSLNC LGVIEVVMTT QKANCRPEFE SVCKALEAVD 720 LRSSEVSNGQ NVKACTGSSQ AALREILEVL RSACGTHQLP LAQTWVPCIQ QGKEGSRHSD 780 ENHTRCVSTV DSACYVTDLR MQDFQEACSE HHLLKGEGVA GQAFMTNQPC FSSDVTSFTK 840 TEYPLSHHAK IFGLRAAVAI RLRSIYTGTA DFVLEFFLPV DCTAFEEQRK MLASLSMIIQ 900 RVCRSLRIIT DKELEEENKA IRESGNAVPL FQEKPSEASM KKSLDFKKSQ QDPSLRPSVS 960 FSGDHSSFGE GRFLNAEKAG ERRFAKAEKT ITLQTLRQYF SGSLKDAAKS LRVCPTTLKR 1020 ICRQHGIKRW PSRKIKKVGH SLQRLQTVMD SVQGGSGAFQ IESFYSNFPD LASPNMSRIS 1080 PFSTSKPNYQ SKLPNVQPKS GTFSPQSAAK TQPNASTLNT IGGEDQVAKE TPGISVLKRA 1140 RSEVKLHVSS DEVQKTLPRS QSHKSLIEHR KSEKRPPVPR SGGKSQKQDA LRIKVTYEEE 1200 KIRFRMQNKW AYKNLLQEIA RRFAIDDTNG FHLKYLDDEF DWVSLTCDAD LEECIDLCRL 1260 TQTHTIKLSL FQNPQQHSGS SFGSSSPS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4qon_A | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qon_B | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qon_C | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qon_D | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoo_A | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoo_B | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoo_C | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoo_D | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qop_A | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qop_B | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qop_C | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qop_D | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoq_A | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoq_B | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoq_C | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qoq_D | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qor_A | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qor_B | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qor_C | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
4qor_D | 1e-158 | 26 | 450 | 10 | 441 | Catalase |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010663967.1 | 0.0 | PREDICTED: protein NLP4 | ||||
Refseq | XP_010663969.1 | 0.0 | PREDICTED: protein NLP4 | ||||
TrEMBL | A0A2R6RMF5 | 0.0 | A0A2R6RMF5_ACTCH; Uncharacterized protein | ||||
STRING | PGSC0003DMT400025657 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1598 | 24 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20640.2 | 0.0 | Nin-like family protein |