PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn343181
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 1289aa    MW: 145786 Da    PI: 8.3791
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn343181genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK90.31.5e-289871038152
      RWP-RK    1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52  
                  aek+i+l++l++yFs+++kdAAk+L vc+T+LKriCRq+GIkRWP+Rkik++
  Achn343181  987 AEKTITLQTLRQYFSGSLKDAAKSLRVCPTTLKRICRQHGIKRWPSRKIKKV 1038
                  589***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.180.103.4E-17219371IPR011614Catalase core domain
SuperFamilySSF566342.09E-19519476IPR020835Catalase-like domain
PROSITE profilePS5140270.49922495IPR018028Catalase, mono-functional, haem-containing
CDDcd08154024480No hitNo description
SMARTSM010604.9E-23926404IPR011614Catalase core domain
PfamPF001991.5E-16626401IPR011614Catalase core domain
PRINTSPR000671.4E-653457IPR018028Catalase, mono-functional, haem-containing
PROSITE patternPS0043805773IPR024708Catalase active site
PRINTSPR000671.4E-6597115IPR018028Catalase, mono-functional, haem-containing
PRINTSPR000671.4E-65118135IPR018028Catalase, mono-functional, haem-containing
PRINTSPR000671.4E-65137155IPR018028Catalase, mono-functional, haem-containing
PRINTSPR000671.4E-65302329IPR018028Catalase, mono-functional, haem-containing
PRINTSPR000671.4E-65334360IPR018028Catalase, mono-functional, haem-containing
PROSITE patternPS004370347355IPR002226Catalase haem-binding site
PfamPF066285.7E-10426476IPR010582Catalase immune-responsive domain
PROSITE profilePS5151916.799751058IPR003035RWP-RK domain
PfamPF020426.2E-269901038IPR003035RWP-RK domain
SuperFamilySSF542775.4E-2311821277No hitNo description
Gene3DG3DSA:3.10.20.2404.8E-2311871272No hitNo description
SMARTSM006663.3E-2511901273IPR000270PB1 domain
PROSITE profilePS5174524.23711901273IPR000270PB1 domain
PfamPF005648.4E-1811911272IPR000270PB1 domain
CDDcd064078.97E-3811911272No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0055114Biological Processoxidation-reduction process
GO:0004096Molecular Functioncatalase activity
GO:0005515Molecular Functionprotein binding
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 1289 aa     Download sequence    Send to blast
MEVVKSGGGD WAALLPSSAN DSPFWTTNSG APVWNNNSSM TVGTREHYHL LEKLANFDRE  60
RIPERVVHAR GASAKGIFEV THNISHLTFA NFLRAPGVQT PVIVRFSTVI HERGSPETLR  120
DPRGFAVKFY TKEGNFDLVG NNFPVFFIRD GMKFPDMVHA LKPNPKSHIQ ENWRILDFFS  180
HHPESLHMFT FLFDDVGIPQ DYRHMEGFGV NTYTFISKAG KVHFVKFHWK PTCGVRSLLE  240
DEAIKVGGSD HSHATRDLYD SIAAGNYPEW KLFIQTIDPD HEDKLDFDPL DATKIWPEDI  300
FPLQPVGRMV LNKNIDNFFA ENEQLAFCPA IVVPGIYYSD DKLLQTRIFS YADTQRYRIG  360
ANYLQLPANA PKCIYHNNHH DGAMNFMHRD EEVNYFPSRF DPVREAKKYP IPSNVLMGRR  420
EKRVIEKENN FKQPGERYRS WAPDRRERFI SRWIEALSDP RLTHEIRSIW ISYWSQECPR  480
IQESSCFEAS NGEPSVNSLQ NNAQQERQRS SFPENLTTSE PQVQNLTKTS SPSHNLLDLS  540
GCSDLSGRFW IGPKANSGPG SSVMDRLIRA LGYIKDSTRN KDALIQLWVP VNSGGRRFLT  600
TNDQPFFLDF NSPGLASYRD ISVNYQFPTE ENSKEIVGLP GRVFKGKVPE WSPDVRFFRN  660
DEFARVDHAQ QCGIRGTLAL PVFEQGSLNC LGVIEVVMTT QKANCRPEFE SVCKALEAVD  720
LRSSEVSNGQ NVKACTGSSQ AALREILEVL RSACGTHQLP LAQTWVPCIQ QGKEGSRHSD  780
ENHTRCVSTV DSACYVTDLR MQDFQEACSE HHLLKGEGVA GQAFMTNQPC FSSDVTSFTK  840
TEYPLSHHAK IFGLRAAVAI RLRSIYTGTA DFVLEFFLPV DCTAFEEQRK MLASLSMIIQ  900
RVCRSLRIIT DKELEEENKA IRESGNAVPL FQEKPSEASM KKSLDFKKSQ QDPSLRPSVS  960
FSGDHSSFGE GRFLNAEKAG ERRFAKAEKT ITLQTLRQYF SGSLKDAAKS LRVCPTTLKR  1020
ICRQHGIKRW PSRKIKKVGH SLQRLQTVMD SVQGGSGAFQ IESFYSNFPD LASPNMSRIS  1080
PFSTSKPNYQ SKLPNVQPKS GTFSPQSAAK TQPNASTLNT IGGEDQVAKE TPGISVLKRA  1140
RSEVKLHVSS DEVQKTLPRS QSHKSLIEHR KSEKRPPVPR SGGKSQKQDA LRIKVTYEEE  1200
KIRFRMQNKW AYKNLLQEIA RRFAIDDTNG FHLKYLDDEF DWVSLTCDAD LEECIDLCRL  1260
TQTHTIKLSL FQNPQQHSGS SFGSSSPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4qon_A1e-1582645010441Catalase
4qon_B1e-1582645010441Catalase
4qon_C1e-1582645010441Catalase
4qon_D1e-1582645010441Catalase
4qoo_A1e-1582645010441Catalase
4qoo_B1e-1582645010441Catalase
4qoo_C1e-1582645010441Catalase
4qoo_D1e-1582645010441Catalase
4qop_A1e-1582645010441Catalase
4qop_B1e-1582645010441Catalase
4qop_C1e-1582645010441Catalase
4qop_D1e-1582645010441Catalase
4qoq_A1e-1582645010441Catalase
4qoq_B1e-1582645010441Catalase
4qoq_C1e-1582645010441Catalase
4qoq_D1e-1582645010441Catalase
4qor_A1e-1582645010441Catalase
4qor_B1e-1582645010441Catalase
4qor_C1e-1582645010441Catalase
4qor_D1e-1582645010441Catalase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010663967.10.0PREDICTED: protein NLP4
RefseqXP_010663969.10.0PREDICTED: protein NLP4
TrEMBLA0A2R6RMF50.0A0A2R6RMF5_ACTCH; Uncharacterized protein
STRINGPGSC0003DMT4000256570.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein