PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn341381 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 231aa MW: 25266.5 Da PI: 5.1454 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 42.8 | 1.1e-13 | 27 | 54 | 1 | 28 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28 kprlrWt+eLHerFv+av+qLGG++ t Achn341381 27 KPRLRWTSELHERFVDAVTQLGGPDMST 54 79**********************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.8E-12 | 24 | 55 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.3E-8 | 27 | 54 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 4.2E-26 | 70 | 116 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MYSAIHSLPL DGGVGVDACL VMTSDPKPRL RWTSELHERF VDAVTQLGGP DMSTSHQSWN 60 SEEEKKIGYQ VTEALRVQME VQRRLHDQLE VQRRLQLRIE AQSKYLQSIL EKACKALDDH 120 AAATAGLEAA KEELSDLAIK VSNDFNEMVP SLSEITASLE NKNASNLATR FGDCSVDSCL 180 TSNGSPISPM GAASQAAALK KRSRPFFVNG DSVPLESSVR QVEWMMTNIG * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024197454.1 | 1e-102 | protein PHR1-LIKE 2 isoform X2 | ||||
Swissprot | Q94A57 | 1e-73 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A2R6RXY7 | 1e-134 | A0A2R6RXY7_ACTCH; Protein PHR1-LIKE like | ||||
STRING | XP_002518104.1 | 1e-101 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3791 | 23 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 2e-67 | G2-like family protein |
Publications ? help Back to Top | |||
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