PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn331581
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 290aa    MW: 32873.9 Da    PI: 8.2396
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn331581genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20200250255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr++  +g++vAeIrdp+ +g   r++lg+f+t+ eAa+a+++a+ k++g
  Achn331581 200 HYRGVRRRQ-WGKFVAEIRDPKRRG--SRVWLGTFDTEIEAARAYDQAAFKMRG 250
                 8*****887.**********96554..**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.17E-30199258No hitNo description
Gene3DG3DSA:3.30.730.101.9E-32199259IPR001471AP2/ERF domain
PfamPF008471.8E-14200250IPR001471AP2/ERF domain
SMARTSM003802.0E-37200264IPR001471AP2/ERF domain
PROSITE profilePS5103224.118200258IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-23200259IPR016177DNA-binding domain
PRINTSPR003679.7E-13201212IPR001471AP2/ERF domain
PRINTSPR003679.7E-13240260IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MSTPDEFSAL ALIRQHLFGE FSPVTDLSHT PSFSTTHYCT IRDSENSSSQ SDSFCSQTAS  60
SDCLNFNELN NTKIFDHVSD SMNYEPNHDL FEFQSNPQII ELTTPKAFHH TKIFDSASDS  120
ILFEGNHHDI IEFELKPQTI NLATPKALNS NNQSSSALRS KRSLKIDLAP VNKFEWLNFR  180
EPTKIAVSVE KPSIADERKH YRGVRRRQWG KFVAEIRDPK RRGSRVWLGT FDTEIEAARA  240
YDQAAFKMRG TKAILNFPLQ AGKLCPSGAS VIGGMKRCRE VEERPEKRR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-27199260162ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028112382.12e-82ethylene-responsive transcription factor 5-like
TrEMBLA0A2R6QNU20.0A0A2R6QNU2_ACTCH; Ethylene-responsive transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.12e-42ethylene responsive element binding factor 6