PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn331531
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 303aa    MW: 33440.3 Da    PI: 6.5212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn331531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1899149155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++k +g+W+AeIr+p     r  r +lg++ taeeAa  +++a+ +l+g
  Achn331531  99 TKYRGVRQRK-WGKWAAEIRHP----LRgVRLWLGTYATAEEAALVYDHAAIQLRG 149
                 69*******9.**********7....246*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.3E-1299149IPR001471AP2/ERF domain
CDDcd000184.95E-3199157No hitNo description
PROSITE profilePS5103223.077100157IPR001471AP2/ERF domain
SMARTSM003801.8E-35100163IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-21100157IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-30100158IPR001471AP2/ERF domain
PRINTSPR003671.2E-9101112IPR001471AP2/ERF domain
PRINTSPR003671.2E-9123139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MLESVKYSEH RERIKMERPS LPKFNAVGPR VVRITVNDGD ATDSSGDEDG LLRRQRVKKF  60
VNEVVIEDGS PPTAKVKRRR KATGKAQNLV SRLKLSSGTK YRGVRQRKWG KWAAEIRHPL  120
RGVRLWLGTY ATAEEAALVY DHAAIQLRGP HAQTNFPKPP AKTTFTGDIS GDESHGHSLS  180
SPKSVLRFQI APNEEVESSP SQPNDAVSQC RDINDATNAS ENSGFSPLES LFNCDAFDFQ  240
NQVPDLFDGS GFGDIIFSQD CVGPFLESGY EFGFGQSIWA TEDCFKFQDI GDIFGSDPPI  300
TI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-1996157163ATERF1
3gcc_A5e-1996157163ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240845.12e-86PREDICTED: ethylene-responsive transcription factor CRF2
TrEMBLA0A2R6PI440.0A0A2R6PI44_ACTCH; Ethylene-responsive transcription factor
STRINGXP_009763317.16e-85(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.22e-56cytokinin response factor 2