PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn329031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 164aa    MW: 18630 Da    PI: 8.6218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn329031genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2431.1e-13761254
         AP2  2 gykGVrwdkkrgrWvAeIrd.pse..ng.krkrfslgkfgtaeeAakaaiaarkkle 54
                +y+GVr+++ +g+W  +++  + +  +g +++r++lg+f tae Aa+a+++a++ + 
  Achn329031  7 RYRGVRQRH-WGSWG-YLKKcFLTlfDGnRKTRIWLGTFETAEVAARAYDEAARLMC 61
                69******9.*****.766655558877788**********************8775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.32E-25672No hitNo description
SuperFamilySSF541713.14E-14772IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.1E-23771IPR001471AP2/ERF domain
PROSITE profilePS5103217.78770IPR001471AP2/ERF domain
SMARTSM003807.4E-26776IPR001471AP2/ERF domain
PfamPF008474.7E-8762IPR001471AP2/ERF domain
PRINTSPR003675.6E-11819IPR001471AP2/ERF domain
PRINTSPR003675.6E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MARPQQRYRG VRQRHWGSWG YLKKCFLTLF DGNRKTRIWL GTFETAEVAA RAYDEAARLM  60
CGPRTRTNFP YNASEAQSSS SKILSATLIS KLQRCHVTSQ QVSNKPKTKE PHPYEAQSHH  120
VVSNEGQVGS EQQFKALEDD HIEQMIEELL DYGSIELCSV LPN*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265679.16e-66PREDICTED: ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW54e-58ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A2R6PDF01e-103A0A2R6PDF0_ACTCH; Ethylene-responsive transcription factor
STRINGXP_010265679.12e-65(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13622476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-50ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]