PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn325381
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family CAMTA
Protein Properties Length: 961aa    MW: 107156 Da    PI: 7.6199
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn325381genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.43.6e-55151313118
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e + rwl++ ei+++L n++k++lt+e+++rp+ gsl+L++rk++ryfrkDG+sw+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqrr+yw
  Achn325381  15 QEaQLRWLRPVEICEVLRNHQKFHLTSEPPDRPPAGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYW 113
                 55599********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 +L+eel+++vlvhy+evk
  Achn325381 114 MLDEELDNVVLVHYREVK 131
                 ***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.12210136IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-7813131IPR005559CG-1 DNA-binding domain
PfamPF038593.1E-4816129IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.109.7E-5410496IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.64E-17410496IPR014756Immunoglobulin E-set
PfamPF018332.1E-4414496IPR002909IPT domain
SuperFamilySSF484036.53E-13598695IPR020683Ankyrin repeat-containing domain
CDDcd002042.44E-11603695No hitNo description
Gene3DG3DSA:1.25.40.201.6E-12608696IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.512614679IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.98647679IPR002110Ankyrin repeat
SMARTSM002480.0063647679IPR002110Ankyrin repeat
SMARTSM00015270753775IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525408.5E-8799858IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.69807829IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.718808837IPR000048IQ motif, EF-hand binding site
PfamPF006120.0029809828IPR000048IQ motif, EF-hand binding site
SMARTSM000155.7E-4830852IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.834831859IPR000048IQ motif, EF-hand binding site
PfamPF006127.8E-5832852IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.437912940IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 961 aa     Download sequence    Send to blast
MVNSWTFEGL EQILQEAQLR WLRPVEICEV LRNHQKFHLT SEPPDRPPAG SLFLFDRKVL  60
RYFRKDGHSW RKKKDGKTVK EAHEKLKAGS VDVLHCYYAH GEDNENFQRR SYWMLDEELD  120
NVVLVHYREV KEGSKLCVSR LLKADPGSQL RSSQTSSSPC LEQKNSPILS VQMSNASNPN  180
AVDWNEQSLS SEFQDRDYGE DPGTSSLARP IHGSVSHNAS LLADPATGYL ELSKGLLDPA  240
SVGAVFHHEA GSSMWTDMHG SSGNLHSVHG QKFYFQQLNA ADFLTHKLID AKLDANNTVQ  300
DFVSCGNMLI PDGQIVAQAK IPYAAKVDSQ VGRASNDEAG ELKKLDSFGR WMDKNIGGDC  360
DDSLMASDSG NYWNTLDTEN DKEVSSLSHH MQLSIDELGP SVILQEQLFT ICDFAPDWAY  420
SGVETKVLIT GTFLGDKKHS GSFKWCCMFG EIEVSAEVLT DNVMRCQVPF HAPGRVPLYI  480
TCSNRLACSE VREFEYCERS PEAASSVIVK TAPKDEVLFQ VRLTKMLDVG SERKWLDCSV  540
VGCDKCKLKK NINSLKTKSK IQSKMIENDI VFFEGYNVSL ANSLIQNLLK GTLYEWLICK  600
VHEGGKGPHI LDNEGQGVIH LAAALGFEWA MCPIVASGVS PNFRDVQGRT ALHWASYYGR  660
EETVVALVRL GAAAGAVDDP TSASPGGQTA SDLASDLTSH LSSLTLGENS MESAAATIAA  720
EKATDTAAQN VLSPGMDVNE EHSLRGSLAA VRKSAHAAAL IQDAFRARSF RHRQQTKSNS  780
EISETSLDLV TLGLLNKVQK VSHFEDYLHS AAIKIQQKYR GWKGRRQFLK IRKRIVKIQA  840
HVRGHQVRKQ YKKVVWSVSI VEKAILRWRR KRHGLRGFQM VKTNENAVPE TEKCDEYEFL  900
RIGRRQKIAG VEKALARVQS MVRHPEARDQ YMRLVKKYED SKLSNEAVSA SGHVPVTEER  960
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028068006.10.0calmodulin-binding transcription activator 2-like isoform X1
TrEMBLA0A2R6PVW80.0A0A2R6PVW8_ACTCH; Calmodulin-binding transcription activator 3 like
STRINGVIT_05s0020g00630.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137161011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1