PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn311001
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 294aa    MW: 32480.5 Da    PI: 5.6125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn311001genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-1789138154
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                 s + GVr++k +g+W+AeIrdp     + +r++lg+f +aeeA++a+ia ++++e
  Achn311001  89 SPFVGVRQRK-WGKWAAEIRDPI----KrARIWLGTFLSAEEAREAYIAKKLEFE 138
                 5789*****9.**********73....34*********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.6E-1390144IPR001471AP2/ERF domain
PROSITE profilePS5103217.29390147IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-1490137IPR016177DNA-binding domain
PfamPF008474.4E-1191139IPR001471AP2/ERF domain
CDDcd000187.55E-2091130No hitNo description
PRINTSPR003672.8E-791102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-1891138IPR001471AP2/ERF domain
PRINTSPR003672.8E-7113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MRRIRVVCSD PDATDSSSDE DDQRRPGKSG SLKRVVHQIN LPCEGNGPKK RRWVSNRSSD  60
NPPDGVIEGG DCKIPKKESR VSIQPLGKSP FVGVRQRKWG KWAAEIRDPI KRARIWLGTF  120
LSAEEAREAY IAKKLEFEAK AMAVSKQKDE YIVSPSSVLE NEQLECSGLK KFSQISVSDE  180
LNSGLRRVLS PILKNPNERV PINVGDVIPC EGTAKKLEFE AKFEQKDEPV VSPSSVLENE  240
RLNSGSDGGS DMGNARVKEC GDTRLIIDDH GNLLGEFSRL DDLQICCEDD DSG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028088337.17e-38ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2R6PB820.0A0A2R6PB82_ACTCH; Ethylene-responsive transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-28ERF family protein