PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn305211
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 288aa    MW: 31680.3 Da    PI: 5.3563
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn305211genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.8e-14216261348
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                 + +r+rr++kNRe+A rsR+RK+a++ eLe  + +Le+eN++L ke
  Achn305211 216 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENERLLKE 261
                 679***************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-10214276IPR004827Basic-leucine zipper domain
PfamPF001703.3E-12216261IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.565216261IPR004827Basic-leucine zipper domain
CDDcd147074.13E-17218260No hitNo description
SuperFamilySSF579592.39E-9218261No hitNo description
Gene3DG3DSA:1.20.5.1707.3E-12219261No hitNo description
PROSITE patternPS000360221236IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MASSKVASSS ASRNSDLRRR SSSSASTKSS SISELHSHNN HRNRIKNDGD LGSMTVDGLL  60
KSAYGDNRED ESTLLNAEIT LLDAAGAVTA ISDSDGGTAA IRRQESCVSN NKTVDDVWRE  120
IVAGRRECKQ EAEEEMMTLE DFLAKAGAAE EEEEAAVKVE AAEGLSGGVF TFDQMEMSPF  180
PSERVVDGVV GFGNGVEVVG RKGKRRAALE PLDKAAQQRQ RRMIKNRESA ARSRERKQAY  240
QVELESLAVK LEEENERLLK EKVKSFVFNF CRIVFACYVL QSWFLNN*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024971593.17e-94G-box-binding factor 4-like isoform X2
SwissprotP427773e-41GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2R6RNV10.0A0A2R6RNV1_ACTCH; G-box-binding factor like
STRINGVIT_18s0072g00470.t013e-87(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-32bZIP family protein