PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn304151
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family GeBP
Protein Properties Length: 404aa    MW: 45247.3 Da    PI: 4.9052
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn304151genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573125.22.9e-39156250397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 + rlwseeDeiv+L+G+ d+++k+g++p  d+ af+ef+kks+ ++vs++ql++K+rrLKkKf+++  k ++g++p+fsk+h+ k+felskkiWg
  Achn304151 156 IARLWSEEDEIVFLKGMSDYQSKKGADPNTDMGAFHEFIKKSLRVDVSRNQLMDKVRRLKKKFRNNAGKGEKGEDPVFSKPHEYKSFELSKKIWG 250
                 579*******************************************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-34157250IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MAPKRAPMED PPSASSSSED ESEETSDKED DHPQEQSKEN PESEEEESSE DEDDDDEENK  60
KPSSVQKPNP TETPQPQSDS DSEGSDSETL PSPTASDFTV KPILSKPMAE STNKLALKAP  120
NSGAKHPEES EKRWKESQRK KVKVSNGDAE EKKNPIARLW SEEDEIVFLK GMSDYQSKKG  180
ADPNTDMGAF HEFIKKSLRV DVSRNQLMDK VRRLKKKFRN NAGKGEKGED PVFSKPHEYK  240
SFELSKKIWG EGANNAVDGS AKSPRSTNKK ARKSDKVGNT VLLPKKDGKE VALDEGLKGE  300
VNDMMVDEVK DMKVDEEVFW SMYPRLKESM ELEGTGSAYL TMSVPGKSFL KERMSMIGSA  360
KAKELEEKWR NLREEEVSLY LKRVDLIKEQ AKAVLDSMKT SKS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028055999.11e-100STOREKEEPER protein-like
TrEMBLA0A2R6QCE20.0A0A2R6QCE2_ACTCH; STOREKEEPER protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.19e-30DNA-binding storekeeper protein-related transcriptional regulator