PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn296661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 325aa MW: 36219.8 Da PI: 10.6996 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29 | 2.3e-09 | 248 | 302 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka.......eieeLeekvkeLeaeNkaLkkeleel 52 +r +r++kNRe+A rsR+RK++ ++ eLe +v+ L +eN +L+++ ++l Achn296661 248 RRHKRMIKNRESAARSRARKQEnlspacaYTNELELEVAHLMEENARLRSQQQQL 302 699******************64444444889******************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.7E-6 | 244 | 312 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.76 | 246 | 302 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.5E-12 | 247 | 302 | No hit | No description |
SuperFamily | SSF57959 | 3.73E-8 | 248 | 302 | No hit | No description |
Pfam | PF00170 | 2.0E-7 | 248 | 302 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.74E-26 | 248 | 309 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 251 | 266 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MTRMTRRRGI VLRGAPLFIK WRNRERGKAI PHQSPSTVNL SKPLLSALDS TSTHPKLGTS 60 PLQSSLFELE SDQYDGFERR QPNRYNISDF MNLNFSHKHL DIYKFPNQNL NRNPGPSPRT 120 MEEVWNDVSL ASLHDQPTRD DPTRNPTFRG LTFLDFLSRP AGHNQPPSAG YGSPASPPAV 180 ALSLNSGPDR FGPMASSDPI GTDMILQTPP VSNISSMNVS FEALASAASL PELGKKRFPE 240 SDGNPGNRRH KRMIKNRESA ARSRARKQEN LSPACAYTNE LELEVAHLME ENARLRSQQQ 300 QLYLAAASQV PRKKTLHRTS TAPF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX417425 | 0.0 | JX417425.1 Actinidia chinensis FD protein (FD) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028105167.1 | 2e-77 | protein FD-like | ||||
Swissprot | Q84JK2 | 2e-49 | FD_ARATH; Protein FD | ||||
TrEMBL | R4JUP0 | 1e-147 | R4JUP0_ACTCH; FD protein | ||||
STRING | EOX90780 | 5e-64 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-32 | bZIP family protein |