PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn292641 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | FAR1 | ||||||||
Protein Properties | Length: 135aa MW: 15387.4 Da PI: 8.47 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 34.5 | 7e-11 | 42 | 131 | 1 | 76 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekdgkw 76 k+Y++Y+++ F ++++ s+k +r++ +t+ +vC kegk ++ +k +k++r+ ++ ++gC+a+l++k++ kw Achn292641 42 KYYEDYGRQNDFWICTRISSKGqNRSDDVTSVLLVCAKEGKYVPKAEKdgvegndkragddkvlPKKRKRSCSTAKCGCNAHLRIKRD---KW 131 69**********9988766665367888**************9999999*************998999999999************98...44 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.2E-8 | 42 | 132 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MEESFGLDDF EVENMKTPNN VVETLEAPSS EMSFEIIKEA RKYYEDYGRQ NDFWICTRIS 60 SKGQNRSDDV TSVLLVCAKE GKYVPKAEKD GVEGNDKRAG DDKVLPKKRK RSCSTAKCGC 120 NAHLRIKRDK WRLK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 111 | KKRKRS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008219733.2 | 5e-29 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A2R6R5G6 | 5e-57 | A0A2R6R5G6_ACTCH; Protein FAR1-RELATED SEQUENCE like | ||||
STRING | EMJ10165 | 2e-27 | (Prunus persica) |