PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn280481 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 106aa MW: 11662.3 Da PI: 6.7162 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 83.8 | 1.8e-26 | 1 | 48 | 4 | 51 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 +rWt++LH++F++av+ LGG+ +AtPk++lelm+vk+Ltl+hvkSHLQ Achn280481 1 MRWTSTLHAHFIHAVQLLGGHGRATPKSVLELMNVKDLTLAHVKSHLQ 48 79********************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.69E-12 | 1 | 48 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.0E-20 | 1 | 49 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 6.1E-22 | 1 | 48 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 4.9E-6 | 1 | 48 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence Send to blast |
MRWTSTLHAH FIHAVQLLGG HGRATPKSVL ELMNVKDLTL AHVKSHLQVD GHDVALHVLD 60 TENEKLDSST LSSSDVFLNL DFTLGRPNCQ MDYPKSSNDL SLLKC* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010525638.1 | 2e-30 | PREDICTED: probable transcription factor KAN4 | ||||
TrEMBL | A0A4D8Y9Z0 | 6e-30 | A0A4D8Y9Z0_SALSN; Uncharacterized protein | ||||
STRING | XP_010525638.1 | 8e-30 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12262 | 18 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 2e-28 | G2-like family protein |