PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn278691
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 388aa    MW: 41192.6 Da    PI: 9.0597
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn278691genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1742e-23244306163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ +v++L+aeN++Lk e+++lk++++klk e+
  Achn278691 244 ERELKRERRKQSNRESARRSRLRKQAEAEELAIRVDALTAENTTLKTEISRLKENSEKLKLEN 306
                 89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-33193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.7E-19111226No hitNo description
Gene3DG3DSA:1.20.5.1705.3E-18238303No hitNo description
PfamPF001702.1E-21244306IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-21244308IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.231246309IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11247303No hitNo description
CDDcd147021.05E-19249297No hitNo description
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MGNSEETKPS KPEKTSSPPP DQANVHIYPD WAAMQAYYGP RVAVPPYFNS AVAPGQAPHP  60
YMWGPPQPMM PPYVAPYAAI YAHGGVYAHP GVPVATTPNM EAPTISSGNT DQGLLKKLKG  120
FDGLAMSIGN GSADSAEGGA NNAHSQSEET EGSSDGSSGN TAGVGQNGRK RSREETTVTG  180
GENGNTKSQK SPVPSGEVNG GSDKVMVGNT GATKALELRN PPNANANATQ PSAMIPNETW  240
LQNERELKRE RRKQSNRESA RRSRLRKQAE AEELAIRVDA LTAENTTLKT EISRLKENSE  300
KLKLENTTLV EKLKNAQGGL TKEVILTKLD DKRVPVGTEN LLSRVNNSGS VDRSNEGGQS  360
YENNSNSGVK LRQLLGPNPR ADALAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260266RRSRLRK
2260267RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028056737.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028056738.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028056739.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028056740.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028056741.10.0common plant regulatory factor 1-like isoform X1
SwissprotQ990891e-144CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2R6QP300.0A0A2R6QP30_ACTCH; Common plant regulatory factor 1 like
STRINGSolyc01g095460.2.11e-164(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-80G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]