PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn254691
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TALE
Protein Properties Length: 734aa    MW: 80175.4 Da    PI: 7.147
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn254691genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.8e-095285651954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps +++  L++++gL+ +qV++WF N R +
  Achn254691 528 FEHflHPYPSDADKHLLSRQTGLSRNQVSNWFINARVR 565
                 664459******************************88 PP

2BELL94.59.2e-314064601872
        BELL  18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 +Vd+rY++y+eq+q+v++sF+ v+g gsa pYt+lA+ka+SrhFrcLkdaia q+
  Achn254691 406 KVDRRYNHYCEQMQMVVNSFDLVMGFGSAVPYTALAQKAMSRHFRCLKDAIAAQL 460
                 7***************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.1E-67325458IPR006563POX domain
PfamPF075266.1E-42330457IPR006563POX domain
PROSITE profilePS5007112.212506569IPR001356Homeobox domain
CDDcd000861.48E-12509570No hitNo description
SMARTSM003893.6E-9509573IPR001356Homeobox domain
SuperFamilySSF466891.03E-16511576IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-28512575IPR009057Homeodomain-like
PfamPF059209.9E-18526565IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    Send to blast
MGIAAQPLPS IVSQQKGPIH ILGNPNSTNS MSQDYHNHSG IFSFSNGFER AQQQQQHQIE  60
QQIRRDKLRV QGLEPPPPLV AIEEEPGGLP GYESPGMLSE MFNFQPGAAT ATELLESQIP  120
PNYRALGGEW YGRPGGFEPH SRENEGLHHG HPHPQQIPGI NAESAAAMQL FHMNPQPRSP  180
SPSPSQHNHH PPPSTSSTLH MLLPNPSPNP TLHPFHHNPI GNSSPEGGHF GPNNSQFTWV  240
PNSGGHHEGN ATVQLNNEIG GIVEGQGLSL SLSSSLQRLE AVKAEELRMG DGGMLFFNQG  300
GESSTLQYRL GGQNHQVHSG LGSSLGVVNV LRNSKYAKAA QELLEEFCSV GRGQFKKNKF  360
GKHKTNKNPN SNPSSSSGGG SGGGSSASKD LPPLSAADRI EHQRRKVDRR YNHYCEQMQM  420
VVNSFDLVMG FGSAVPYTAL AQKAMSRHFR CLKDAIAAQL KHSCELLGEK DIGTSGVTKG  480
ETPRLKLLDQ SLRQQRAFHQ MGMMEQEAWR PQRGLPERSV NILRAWLFEH FLHPYPSDAD  540
KHLLSRQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQEAQ EGEEEEEEAD QDREKDQNHL  600
AQTPTPSLTA TATNTSTTTT LAPKRSQNNA LENDPSLIAI NRQPYLSENQ ANNKTSSATT  660
TIMSTMIMAT STPAAALAPP PYLAVHEADI ACVRGGMIRF GTAGGDVSLT LGLRHTGNVP  720
EKSPFSVRDF GAC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16515573563Homeobox protein Meis2
3k2a_B6e-16515573563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002269670.20.0PREDICTED: BEL1-like homeodomain protein 2
RefseqXP_019075099.10.0PREDICTED: BEL1-like homeodomain protein 2
SwissprotQ9SW801e-163BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A2R6RLC90.0A0A2R6RLC9_ACTCH; BEL1-like homeodomain protein
STRINGVIT_04s0023g01020.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-136BEL1-like homeodomain 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]