PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn253771
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 439aa    MW: 48866.4 Da    PI: 9.4969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn253771genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-18273321355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  Achn253771 273 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYILRG 321
                 8******9.**********955...5**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.79E-31271331No hitNo description
Gene3DG3DSA:3.30.730.105.0E-31272330IPR001471AP2/ERF domain
PROSITE profilePS5103222.234272329IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-22272330IPR016177DNA-binding domain
SMARTSM003803.1E-34272335IPR001471AP2/ERF domain
PRINTSPR003671.6E-10273284IPR001471AP2/ERF domain
PfamPF008471.7E-11273320IPR001471AP2/ERF domain
PRINTSPR003671.6E-10295311IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MHASINRKNG GRKSIKNGKH ELKVINFFSL EQADLTQTNN FSFVNKKIAS MENKFPTMEK  60
EFPSYLQVMA TGSSVCLDAA NVLGIANETL CRDGGGGSSS SVKLSSSSSD RIFSSLESNS  120
PTETLSTIPH TNAHGGYIPL NFLKSFEPSS PPSSSSPLKS PNLGLFMQKH SIFDMSTQAS  180
TESPRKTQMC EPVLSSPYHP FSVPQLGQSQ LQQGIEWIKI NQNTTNYSSK GFSDYWLSTT  240
KTQPMKYIGR RMQPPNYQKA TLPSTSPCER KLFRGVRQRH WGKWVAEIRL PRNRTRVWLG  300
TFDTAEEAAF AYDTAAYILR GDYAHLNFPD LKHQLASSAN CATKALLEAK LQAMSGNKKA  360
IDPQPTSPKK DLFKGLSHID LTRREWEFDL ESKAGSEMVM IENKKKSTQE LLSDVEAVQL  420
SRIPSLDMDM IWDALPDS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-19271329160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028118941.11e-138ethylene-responsive transcription factor ERF062
TrEMBLA0A2R6R8V00.0A0A2R6R8V0_ACTCH; Ethylene-responsive transcription factor
STRINGEOY052851e-109(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA109211825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-59ERF family protein