PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn253691 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 138aa MW: 15725 Da PI: 10.5631 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 25.7 | 1.5e-08 | 20 | 44 | 6 | 30 |
HHHHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 6 ksnrqvtfskRrngilKKAeELSvL 30 k qv f kR g++KKA+EL++L Achn253691 20 KDHLQVKFLKRCIGLFKKASELCIL 44 55679*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00432 | 0.0068 | 7 | 50 | IPR002100 | Transcription factor, MADS-box |
PROSITE profile | PS50066 | 11.031 | 7 | 44 | IPR002100 | Transcription factor, MADS-box |
SuperFamily | SSF55455 | 4.58E-8 | 8 | 46 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 6.1E-8 | 17 | 45 | IPR002100 | Transcription factor, MADS-box |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MTKKPNIGHK KIKIINIKVK DHLQVKFLKR CIGLFKKASE LCILYEFGMN ELEQLRVFMK 60 ELKKHVTNQV NKVLDEGISN LLPFFFGNNG GGMVNNLRVT PLLSMLLQPL LVSIILAMVM 120 AFSKVFDLRD DFVHLPK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |