PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn252191 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 239aa MW: 26943.7 Da PI: 6.288 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22.7 | 2.1e-07 | 62 | 84 | 3 | 25 |
XXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKk 25 ++++ r +++NReAAr+sR+RKk Achn252191 62 ADRVLRQLAQNREAARKSRLRKK 84 6788999***************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.9E-6 | 60 | 129 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MGIYEPIHQM SMWGDFKGNV CPNTSAFMIE EMSTKLNSQS EDTSQGSLEP PNKYIKEAVK 60 PADRVLRQLA QNREAARKSR LRKKFFLANT SMHEPQLNIV LQAYVQQLET SRLKLIQLEQ 120 ELAQAKRQVL MPQFDLWAEQ KLIDIYSLRQ SCQQAEDALS QGMDKLQQIL AESVAAGQQG 180 EGSYIPQVST AMEKLEALVS FVNQFSFHSQ RSKGIFFVGL ESWASVYSSA GSQLLKEE* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021631626.1 | 7e-48 | transcription factor TGA1-like isoform X2 | ||||
Swissprot | P14232 | 7e-32 | TGA1A_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-1A | ||||
TrEMBL | A0A2R6RJS9 | 4e-67 | A0A2R6RJS9_ACTCH; Transcription factor like | ||||
STRING | VIT_07s0031g01320.t01 | 5e-39 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10030.2 | 3e-33 | TGACG motif-binding factor 4 |
Publications ? help Back to Top | |||
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