PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn249781
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 212aa    MW: 23121.3 Da    PI: 4.2826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn249781genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.3e-12176210239
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgta 39 
                 +y+GVr+++ +g+++AeIrd  ++g   r++lg+++t+
  Achn249781 176 HYRGVRRRP-WGKYAAEIRDR-NRG-GSRVWLGTYDTP 210
                 7********.**********3.322.5*********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.9E-16175210IPR001471AP2/ERF domain
PROSITE profilePS5103215.303176211IPR001471AP2/ERF domain
CDDcd000183.01E-15176210No hitNo description
SuperFamilySSF541719.81E-11176210IPR016177DNA-binding domain
PfamPF008477.6E-8176209IPR001471AP2/ERF domain
SMARTSM003803.2E-4176210IPR001471AP2/ERF domain
PRINTSPR003672.5E-7177188IPR001471AP2/ERF domain
PRINTSPR003672.5E-7200211IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MTTDESFALE LIRQHLLGDF TSTGSFISNL SFPASSNGSD PKPVFSFEES DLSPSGSSDS  60
NSPISLPNQY PSPNSDLDYP NPDFNFFEFE SIPPEIFDVK ATRPTAFSSS DLEFFEFDSK  120
PEIADLILPG PKTFSGSDLY ISETLNPEIA DVISPGPNVF NGSGAVGTGS GQTKRHYRGV  180
RRRPWGKYAA EIRDRNRGGS RVWLGTYDTP I*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-13167210548Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6RWH81e-147A0A2R6RWH8_ACTCH; Ethylene-responsive transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-17ethylene responsive element binding factor 5