PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn249191
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 115aa    MW: 12565.3 Da    PI: 8.5169
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn249191genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like69.74.8e-222063144
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtle 44
                k+rlrWt+eLHerFv+ v+qLGG+e+AtPk +l++m+v+gL ++
  Achn249191 20 KQRLRWTHELHERFVDSVAQLGGPERATPKGVLRVMGVQGLKVQ 63
                79***************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.02E-81960IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-181964IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-142061IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MDPMNGGNSL NNNPPSLASK QRLRWTHELH ERFVDSVAQL GGPERATPKG VLRVMGVQGL  60
KVQRLMQLRT EVQGKYWKKI IEEQQRLGGV LSEMPDSGAS VPASGDNCPE SDIN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006449963.12e-46myb family transcription factor PHL7 isoform X2
SwissprotQ9SJW05e-23PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2N9INB11e-47A0A2N9INB1_FAGSY; Uncharacterized protein
STRINGXP_006467243.18e-41(Citrus sinensis)
STRINGVIT_00s0475g00040.t019e-41(Vitis vinifera)
STRINGXP_006449962.18e-41(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.17e-25G2-like family protein