PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn245851
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 373aa    MW: 39540.6 Da    PI: 9.335
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn245851genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_174.61.3e-23229291163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 ++elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L+aeN++Lk e+++lk++++klk e+
  Achn245851 229 DRELKRERRKQSNRESARRSRLRKQAEAEELAIKVDALSAENTTLKTEISRLKENSEKLKLEN 291
                 689*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.1E-202078IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-1796211No hitNo description
Gene3DG3DSA:1.20.5.1704.4E-17223288No hitNo description
SMARTSM003382.4E-21229293IPR004827Basic-leucine zipper domain
PfamPF001702.9E-21230291IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.242231294IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10232288No hitNo description
CDDcd147022.72E-19234282No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MGNSEETKPS KPEKTSSPPP AYYGPRVAVP PYFNSAVAPG HAPHPYMWGP PQPMMPPYGA  60
PYAAIYAHGG VYAHPGVPFA TTTNVETPTK SSGNTDQGLL KKLKGFDGLA MSIGNGSADS  120
AERGANNAHT QSEETEGSSD GSSGNTAGVG QNGRKRSREE TTVTGGENGN TKSKKSPVPA  180
GEVNGGSDKV MVGNTGATKA LELRNPPDAN ANATQPSAMI PNEAWLQNDR ELKRERRKQS  240
NRESARRSRL RKQAEAEELA IKVDALSAEN TTLKTEISRL KENSEKLKLE NTTLMETLKN  300
GQGGLTEEVI LTKLDDKRVP VSTENLLSRV NNSGSVDRSD EGSQSYENNS NSGVKLRQLL  360
GARSRADAVA AG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1245251RRSRLRK
2245252RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028056737.11e-176common plant regulatory factor 1-like isoform X1
RefseqXP_028056738.11e-176common plant regulatory factor 1-like isoform X1
RefseqXP_028056739.11e-176common plant regulatory factor 1-like isoform X1
RefseqXP_028056740.11e-176common plant regulatory factor 1-like isoform X1
RefseqXP_028056741.11e-176common plant regulatory factor 1-like isoform X1
SwissprotQ990891e-129CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2R6RCM40.0A0A2R6RCM4_ACTCH; Common plant regulatory factor 1 like
STRINGEMJ192541e-145(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-67G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]