PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn245111
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 366aa    MW: 40687.3 Da    PI: 4.3364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn245111genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.4e-184996455
         AP2  4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa a+++a+  l+g
  Achn245111 49 VGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAAMAYDEAACLLRG 96
                6******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.2E-3347110IPR001471AP2/ERF domain
PROSITE profilePS5103218.80847104IPR001471AP2/ERF domain
PRINTSPR003675.2E-74859IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1948104IPR016177DNA-binding domain
PfamPF008477.7E-134996IPR001471AP2/ERF domain
CDDcd000185.19E-3049103No hitNo description
Gene3DG3DSA:3.30.730.102.7E-2650103IPR001471AP2/ERF domain
PRINTSPR003675.2E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MARKRKAGGE AEEKNNPDVE ANLAWDEMVK EASTTVALGG PRRARNRLVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAAMAYDEA ACLLRGANTR TNFWPCSPSS CSAPALPSKI  120
TNLLLQRLQA RNSSLVASSA RNIYQHKNNK KAEFIIDELA DFSNTQLTDF LVDPEYYPIP  180
DNYNTITNSF MKESCEVREQ DFDNNLSDTA DSTSGDGNFG GVIEEDGEVE EEGTDLGVID  240
FKFVDEVGSC YCSPFEIAEE ISEPMEQEPC GDEPSMLREA MKRMKYERKF SASLYAFNGI  300
PECLRLKLRG VKARKEEKNM ESDSGELKGD KQEENELGGS SEMGSIDGEL SLWSSLDLPP  360
ICFVN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021603585.11e-134ethylene-responsive transcription factor RAP2-11-like
RefseqXP_021679289.11e-134ethylene-responsive transcription factor 1-like
TrEMBLA0A2R6RUF50.0A0A2R6RUF5_ACTCH; Ethylene-responsive transcription factor RAP2-11 like
STRINGcassava4.1_008867m1e-133(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-21related to AP2 11