PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn237931
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 409aa    MW: 44788.6 Da    PI: 6.9789
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn237931genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-10212270563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  l+     l+ e+
  Achn237931 212 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLTVEN 270
                 9********************************************99998887777766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-15208272IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852210273IPR004827Basic-leucine zipper domain
PfamPF001708.2E-9212264IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.0E-11212263No hitNo description
Gene3DG3DSA:1.20.5.1705.7E-11212266No hitNo description
CDDcd147032.20E-25213262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MEKDKSLNHG GSSLPPSGRH SVFSHHGNSL LPPLGSGGAS ETSHFGHGMS SDSSRFSHDV  60
SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGGLD GPSLSDETEE DLFSMYLDMD  120
KFNSSSATSA FHVGGPSSAA ASASAPTHLA ENVALASSER PRVRHQHSQS LDGSTTIKPE  180
MLMSGSDEAS AADSKKAMSA AKLAELALLD PKRAKRIWAN RQSAARSKER KMRYISELER  240
KVQTLQTEAT SLSAQLTLLQ RDTNGLTVEN SELKLRLQTM EQQVHLQDAL NDALKEEIQH  300
LKILTGQAIP NGGPMMNFPP FGANQPFYPN NQALHTLMAA QQFQQLQIHP QKQQHQFQQH  360
QLHQFQQQQL LHQQQEQHLH QSGDLRMHRP SSGQKENASN GNPSSSKD*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7712910.0KC771291.1 Camellia sinensis bZIP transcription factor family protein 11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027117495.10.0probable transcription factor PosF21
RefseqXP_027117496.10.0probable transcription factor PosF21
RefseqXP_027117497.10.0probable transcription factor PosF21
SwissprotQ040881e-153POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2R6R9340.0A0A2R6R934_ACTCH; Transcription factor PosF21 like
STRINGXP_008222595.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-121bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]