PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn234051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | HB-other | ||||||||
Protein Properties | Length: 327aa MW: 36995.2 Da PI: 6.2539 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 50 | 105 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t++q++eLe++F++n++p+++er eL k+l+L+ +q+k+WFqNrR+++k Achn234051 50 RKKYHRHTPYQIQELEAYFKMNNHPDEKERLELGKRLSLESKQIKFWFQNRRTQMK 105 7999*************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.0E-21 | 36 | 105 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.52E-20 | 38 | 105 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.41 | 47 | 107 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.3E-16 | 49 | 111 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.42E-17 | 50 | 105 | No hit | No description |
Pfam | PF00046 | 3.8E-18 | 50 | 105 | IPR001356 | Homeobox domain |
PROSITE profile | PS50848 | 12.695 | 278 | 326 | IPR002913 | START domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MEGQSHVALM GGDFNPSLVA RIEEDGNESD RLEGASGDDQ DAAGNKHPRR KKYHRHTPYQ 60 IQELEAYFKM NNHPDEKERL ELGKRLSLES KQIKFWFQNR RTQMKVSIFR FSLFMKCDLL 120 VLSYGTEISL FNQTQTERHE NNYLKRQNEE LLIENIRMKE VMGNPMCCNC GGPAILGEVS 180 IEKHHLRVEN ARLKEELNRI SALANRFLGR PISSFAGLVH PPMSNTSLEL AVGINGFSGL 240 SSVNTTFPIG LDSKDGILNT LPGMPLVPPP PTGIARNEPF EKSIFLELAL RAMDELVKLA 300 QMDDPLWIRS LDGGREVLNE EEYMKI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028088472.1 | 1e-137 | homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 | ||||
Refseq | XP_028088473.1 | 1e-137 | homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X2 | ||||
TrEMBL | A0A2R6PM52 | 0.0 | A0A2R6PM52_ACTCH; Homeobox-leucine zipper protein like | ||||
STRING | cassava4.1_001764m | 1e-115 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13886 | 8 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.2 | 1e-85 | HD-ZIP family protein |