PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn230471
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 334aa    MW: 37731.6 Da    PI: 10.5728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn230471genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.2e-11192250563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 k ++r   NR +A rs +RK ++i eLe kv +L++e ++L  +l+ l+ e+a l s++
  Achn230471 192 KLAKRILANRQSAARSKERKMQYISELEHKVLTLQTEATTLSTQLKVLQGESAGLSSQN 250
                 889************************************************99999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-17188252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.243190253IPR004827Basic-leucine zipper domain
PfamPF001707.6E-10192250IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.98E-11193244No hitNo description
CDDcd147031.55E-17194240No hitNo description
Gene3DG3DSA:1.20.5.1706.2E-12194248No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MVNIIKHALG QLNKTKGTKL LQYKGSKILL RVKLQNKQSH RSYPTYEILL GFNRLYRMTR  60
KFASDEVAEI LQHKARENTL LFGTQSTNTT GNPISQASKI LLLSIDKWQL HRSTQRSVSM  120
NSFMENMNFA DESQKLPLYL GTRVGVHSPS NSLDGNSMKF SLEFGNNEFS GLELKKIMAN  180
EKLAEIALSD PKLAKRILAN RQSAARSKER KMQYISELEH KVLTLQTEAT TLSTQLKVLQ  240
GESAGLSSQN NELKFRLQAM EQQAQLRDVA LLLLNTAREK KILSVYVAAL NEALAMEVQR  300
LKLATGELRR DVRPDDGLVQ KNSMTYQLFG MQK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204212ARSKERKMQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022763136.18e-86transcription factor RF2a-like
TrEMBLA0A2R6RMP41e-113A0A2R6RMP4_ACTCH; Transcription factor like
STRINGEOX978378e-85(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-68bZIP family protein