PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn219141
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 497aa    MW: 53912.8 Da    PI: 6.0379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn219141genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18355402556
         AP2   5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 GVr ++ +gr++AeIrd ++    ++r++lg+f+t+ eAa a+++a+++l+g+
  Achn219141 355 GVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPIEAALAYDEAARSLRGH 402
                 9*****.**********883....5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525406.47E-10140198IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.0E-13140227IPR027417P-loop containing nucleoside triphosphate hydrolase
CDDcd000464.00E-8141243No hitNo description
PROSITE profilePS5103220.033352409IPR001471AP2/ERF domain
PRINTSPR003671.4E-6353364IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-28355410IPR001471AP2/ERF domain
SMARTSM003804.9E-31355415IPR001471AP2/ERF domain
PfamPF008471.6E-11355402IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-19355409IPR016177DNA-binding domain
CDDcd000181.67E-26355408No hitNo description
PRINTSPR003671.4E-6375391IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MQCLLRISSM TAQKRSQEGP PEEDDGSLQR HLNLQERTED NEVVIVAGLR LFYFAETDGS  60
GSSTDGDKDE NNECPACRAH CASRRSLRDD PNFDALIAVL YPDIDKYEEE ELALYEEDKA  120
RNNQRPYLSC RPTLSVQHLR EVIVLIGETG SGKSTQIVQF LADSELGASG SIVCTQPRKI  180
AAVSLAKRIG EETNGCYGDD SIICYPTYSS IKGFKSKTRV QYVTFQTSLL PEELEIFVVK  240
KLHSKLNSSA STGVIIPKSN ILDLSKFELQ ILEEHDTLAG LQATCNFSQG HLDPKIRPVG  300
PPIALTQSKF DRAAPSSPNG TTSNVSLADV LDHVGSKDSL LPPRGSGRRS TDKGGVRKRP  360
WGRYAAEIRD PWKKTRVWLG TFDTPIEAAL AYDEAARSLR GHKAKTNFPS LPPPPPPELS  420
LNLHSPPGRL PIGHFLGTGV LTADVADSSV TDGRFVGVAG EGPVPVPESS APAGCLGVVR  480
RGLPIDLNEP PPLWLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-18344409672Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-33ERF domain protein 12