PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn214181

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 531aa MW: 56814.9 Da PI: 7.065

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn214181	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.7	1.2e-08	167	212	4	49
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r +NR +A rs RK ++ eLe+ v++L+++ + L ++ Achn214181 167 AKRVKRILSNRQSAARSKDRKHRYLTELEQQVQSLQSKATNLSAQI 212 79************************************99998766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-14	164	228	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.22	166	229	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-7	167	217	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.2E-8	168	222	No hit	No description
SuperFamily	SSF57959	2.46E-10	168	222	No hit	No description
CDD	cd14703	5.91E-19	169	218	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MDKPDPSNPN PNSIIPNNDS DNSNDDVNPI SSQHASNDPS PPPTPTTPPP IKIPEISDDS 60 DSVFKALYHR RVHSDGDFQT SAFDNRGGEP SGDLFNGSSS DTDDLVYKFL KLDEDGGDGD 120 CVDPDGFDGD GDGGEGGRKK SMRRSRSYEA RKALPPQKLA GIWSVDAKRV KRILSNRQSA 180 ARSKDRKHRY LTELEQQVQS LQSKATNLSA QITIYQRDTT GLTTENAELK IRLQAMEQQA 240 QLGEAVSGAL MQELQRLQIA TGEITTPNKP PSLGLRLAPS TSLPSPSTSQ PVPDSPLTSP 300 STPQSVHYSI PLTSPSTPQS MHYSSPLTSP INPAVRALQP TNLPINHAAR TLQPVNLPIN 360 CAVNSAARAL QPINLSVNRA LQPIDVPFNR AVQCSSLTSP SSPSVLYSVL TSPTTVHSSP 420 LTSPSAAQTI SRRAASPSPR TTANAVFPLL RQSVPVLAQL PPLHTFRSRH RFRAANPQSP 480 PLQNDSLCPS QGVDTSNTES NAPNVEGPPV SGIESSSTTQ PTTPSDTKFN *

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MDKPDPSNPN PNSIIPNNDS DNSNDDVNPI SSQHASNDPS PPPTPTTPPP IKIPEISDDS  60
DSVFKALYHR RVHSDGDFQT SAFDNRGGEP SGDLFNGSSS DTDDLVYKFL KLDEDGGDGD  120
CVDPDGFDGD GDGGEGGRKK SMRRSRSYEA RKALPPQKLA GIWSVDAKRV KRILSNRQSA  180
ARSKDRKHRY LTELEQQVQS LQSKATNLSA QITIYQRDTT GLTTENAELK IRLQAMEQQA  240
QLGEAVSGAL MQELQRLQIA TGEITTPNKP PSLGLRLAPS TSLPSPSTSQ PVPDSPLTSP  300
STPQSVHYSI PLTSPSTPQS MHYSSPLTSP INPAVRALQP TNLPINHAAR TLQPVNLPIN  360
CAVNSAARAL QPINLSVNRA LQPIDVPFNR AVQCSSLTSP SSPSVLYSVL TSPTTVHSSP  420
LTSPSAAQTI SRRAASPSPR TTANAVFPLL RQSVPVLAQL PPLHTFRSRH RFRAANPQSP  480
PLQNDSLCPS QGVDTSNTES NAPNVEGPPV SGIESSSTTQ PTTPSDTKFN *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028102355.1	2e-78	transcription factor RF2b-like
TrEMBL	A0A2R6QST0	0.0	A0A2R6QST0_ACTCH; Transcription factor RF2b like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06850.2	3e-48	basic leucine-zipper 52