PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn211341 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | TALE | ||||||||
Protein Properties | Length: 765aa MW: 84174.1 Da PI: 6.1376 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.3 | 6.1e-09 | 563 | 600 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ L++++gL+ +qV++WF N R + Achn211341 563 FEHflHPYPSDADKHLLSRQTGLSRNQVSNWFINARVR 600 664459******************************88 PP | |||||||
2 | BELL | 94.4 | 1e-30 | 441 | 495 | 18 | 72 |
BELL 18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +Vd+rY++y+eq+q+v++sF++v+g gsa pYt lA+ka+SrhFrcLkdaia q+ Achn211341 441 KVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTMLAQKAMSRHFRCLKDAIAAQL 495 7***************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 9.4E-64 | 364 | 493 | IPR006563 | POX domain |
Pfam | PF07526 | 5.8E-41 | 369 | 492 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.212 | 541 | 604 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.30E-12 | 544 | 605 | No hit | No description |
SMART | SM00389 | 3.6E-9 | 544 | 608 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.11E-16 | 546 | 611 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.8E-28 | 547 | 610 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.0E-17 | 561 | 600 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 765 aa Download sequence Send to blast |
MSESFANLRA KREREGERDG GDDDDDDDDD DEEEEEDTNM GIAAEPLPSI ISHPKGPIHI 60 ILGESNSANS MSQDYHNHPG IFSFSNGFDR SQQQQQHLIE QQIRRDKLGV QGFEPPPSLM 120 AIEEEPGGLP GYESAGMLSE MFNFPPRAAT ATELLESQIP PNYRHARGRE WYGRPGGFGP 180 RENEGLHHGH PHPQQIPGIN AESAAAMQLF LMNPQPRSPS SSPSHHHQPR PTPSTSSTLH 240 MLLPNPSPTS NLQSFHHNPI GNSSPTGGHF GPNNSQFTWV PNSGHDEGNT TVQLNNEIGG 300 IVEGQGLSLS LSSSLQRMEA VKAEELRMGD GGMLFFNQSG ESSTSPYQLG GQNHQVHIGF 360 GSSLGVVNVL RNSKYAKAAQ ELLEEFCSVG RGQFKKNKFG KHNTNNPNPN PSSSSGGSGS 420 SASKDLPPLS AADRIEHQRR KVDRRYNHYC EQMQMVVNSF DMVMGFGSAV PYTMLAQKAM 480 SRHFRCLKDA IAAQLKHSCE LLGEKDMGTS GVTKGETPRL KLLEQSLRQQ RAFHQMGMME 540 QEAWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS RQTGLSRNQV SNWFINARVR 600 LWKPMVEEMY QQEAKEEEEE EEADQDRERD QNHLAQPPTP PLTTTTTNAS TTTPKRSQLN 660 ALENDPSLIA INRQQCFSEN QANNNTSSST TTTMSNIILA TSTAAAAVAA PQYPSVHESD 720 VACLRGGVIR FGTAGGDVSL TLGLRHAGNV PEKSSFSVRD FGAC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 6e-16 | 550 | 608 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 6e-16 | 550 | 608 | 5 | 63 | Homeobox protein Meis2 |
4xrm_A | 7e-16 | 550 | 608 | 5 | 63 | Homeobox protein Meis2 |
4xrm_B | 7e-16 | 550 | 608 | 5 | 63 | Homeobox protein Meis2 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002269670.2 | 0.0 | PREDICTED: BEL1-like homeodomain protein 2 | ||||
Refseq | XP_019075099.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 2 | ||||
Swissprot | Q9SW80 | 1e-170 | BLH2_ARATH; BEL1-like homeodomain protein 2 | ||||
TrEMBL | A0A2R6PAI8 | 0.0 | A0A2R6PAI8_ACTCH; BEL1-like homeodomain protein | ||||
STRING | VIT_04s0023g01020.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3341 | 21 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36870.2 | 1e-144 | BEL1-like homeodomain 2 |
Publications ? help Back to Top | |||
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