PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn211341
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TALE
Protein Properties Length: 765aa    MW: 84174.1 Da    PI: 6.1376
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn211341genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.36.1e-095636001954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps +++  L++++gL+ +qV++WF N R +
  Achn211341 563 FEHflHPYPSDADKHLLSRQTGLSRNQVSNWFINARVR 600
                 664459******************************88 PP

2BELL94.41e-304414951872
        BELL  18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 +Vd+rY++y+eq+q+v++sF++v+g gsa pYt lA+ka+SrhFrcLkdaia q+
  Achn211341 441 KVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTMLAQKAMSRHFRCLKDAIAAQL 495
                 7***************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.4E-64364493IPR006563POX domain
PfamPF075265.8E-41369492IPR006563POX domain
PROSITE profilePS5007112.212541604IPR001356Homeobox domain
CDDcd000863.30E-12544605No hitNo description
SMARTSM003893.6E-9544608IPR001356Homeobox domain
SuperFamilySSF466891.11E-16546611IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-28547610IPR009057Homeodomain-like
PfamPF059201.0E-17561600IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    Send to blast
MSESFANLRA KREREGERDG GDDDDDDDDD DEEEEEDTNM GIAAEPLPSI ISHPKGPIHI  60
ILGESNSANS MSQDYHNHPG IFSFSNGFDR SQQQQQHLIE QQIRRDKLGV QGFEPPPSLM  120
AIEEEPGGLP GYESAGMLSE MFNFPPRAAT ATELLESQIP PNYRHARGRE WYGRPGGFGP  180
RENEGLHHGH PHPQQIPGIN AESAAAMQLF LMNPQPRSPS SSPSHHHQPR PTPSTSSTLH  240
MLLPNPSPTS NLQSFHHNPI GNSSPTGGHF GPNNSQFTWV PNSGHDEGNT TVQLNNEIGG  300
IVEGQGLSLS LSSSLQRMEA VKAEELRMGD GGMLFFNQSG ESSTSPYQLG GQNHQVHIGF  360
GSSLGVVNVL RNSKYAKAAQ ELLEEFCSVG RGQFKKNKFG KHNTNNPNPN PSSSSGGSGS  420
SASKDLPPLS AADRIEHQRR KVDRRYNHYC EQMQMVVNSF DMVMGFGSAV PYTMLAQKAM  480
SRHFRCLKDA IAAQLKHSCE LLGEKDMGTS GVTKGETPRL KLLEQSLRQQ RAFHQMGMME  540
QEAWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS RQTGLSRNQV SNWFINARVR  600
LWKPMVEEMY QQEAKEEEEE EEADQDRERD QNHLAQPPTP PLTTTTTNAS TTTPKRSQLN  660
ALENDPSLIA INRQQCFSEN QANNNTSSST TTTMSNIILA TSTAAAAVAA PQYPSVHESD  720
VACLRGGVIR FGTAGGDVSL TLGLRHAGNV PEKSSFSVRD FGAC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16550608563Homeobox protein Meis2
3k2a_B6e-16550608563Homeobox protein Meis2
4xrm_A7e-16550608563Homeobox protein Meis2
4xrm_B7e-16550608563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002269670.20.0PREDICTED: BEL1-like homeodomain protein 2
RefseqXP_019075099.10.0PREDICTED: BEL1-like homeodomain protein 2
SwissprotQ9SW801e-170BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A2R6PAI80.0A0A2R6PAI8_ACTCH; BEL1-like homeodomain protein
STRINGVIT_04s0023g01020.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-144BEL1-like homeodomain 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]