PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn208591
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 324aa    MW: 34977.4 Da    PI: 8.6369
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn208591genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12115158855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk+ q
  Achn208591 115 TERERRKKMRNMFSNLHALLPQL----PPKADKSTIVDEAVNYIKNVQ 158
                 6*********************6....39****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-15106168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.344107157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.3E-14111170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.38E-13112162No hitNo description
SMARTSM003533.3E-8115163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9115158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.5E-4240301No hitNo description
CDDcd048738.55E-5243298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGLHMAVTWG CVGSSGKSAM SEVGGHESFL WETQSWAFLN SDKSGGTDEK SGGRPPDSGS  60
NTQTPTGKEA AGAAGGKKRS GGSKKGGGSG EVSEGKGGGD GVGGGESDHE IHIWTERERR  120
KKMRNMFSNL HALLPQLPPK ADKSTIVDEA VNYIKNVQQS LQKLQRKKLE RLHKVTTSIN  180
FDPSMIVPQK LSADTRETFV ADQVSSNSNS NSNSSGLVSR FPVMFQSWTS QNVVLNVCGD  240
QAQISVCAPK KQGLFTAICY VMEKHKLDVV SAHVSSNQNR TMFMIQAHAR MAPDQLQEAF  300
PVEEIFKQAA GEIMLWISNL ETF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028064501.11e-144transcription factor bHLH95-like
TrEMBLA0A2R6Q6C90.0A0A2R6Q6C9_ACTCH; Transcription factor bHLH95 like
STRINGVIT_03s0063g00170.t011e-126(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-46bHLH family protein