PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn205451 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 19990.5 Da PI: 4.7493 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.7e-20 | 19 | 70 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa a++aa++ l+g+ Achn205451 19 SIYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAATAYDAAALHLRGH 70 57*****999.**********8...557**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.4E-13 | 19 | 70 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.32E-23 | 19 | 78 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.06E-22 | 19 | 79 | No hit | No description |
PROSITE profile | PS51032 | 23.064 | 20 | 77 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.6E-37 | 20 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.3E-32 | 20 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-10 | 21 | 32 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-10 | 43 | 59 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MEGYSSNNYV GGAAGGARSI YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ETPEMAATAY 60 DAAALHLRGH GARLNFPELA HSLPLPWGPS AEDVRLAAQE AALRFQNPSS CFEACFSSSN 120 LAPVTVGLSP SQIQAINESP LDSPKMWMDL TGVMLEERAV FSKDVEMDEW DEITDDSLWD 180 P* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 7e-17 | 21 | 77 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 7e-17 | 21 | 82 | 6 | 68 | ATERF1 |
3gcc_A | 7e-17 | 21 | 82 | 6 | 68 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00227 | DAP | Transfer from AT1G71450 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023894545.1 | 3e-73 | ethylene-responsive transcription factor ERF021-like | ||||
Swissprot | Q9C9I2 | 1e-58 | ERF21_ARATH; Ethylene-responsive transcription factor ERF021 | ||||
TrEMBL | A0A2R6QYU2 | 1e-116 | A0A2R6QYU2_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | POPTR_0013s10340.1 | 1e-69 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-54 | ERF family protein |