PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn184611
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 376aa    MW: 41448.8 Da    PI: 7.9199
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn184611genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1543.7e-17240302163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 +++ k errkq NRe+A+rsR+RK+ae+eeL e+ ++L+ eN aLk+e+++lk+ ++kl+ e+
  Achn184611 240 QRQQKQERRKQANRESAKRSRLRKQAETEELMERYETLKVENIALKSEMNQLKEGSEKLRVES 302
                 5789*******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.3E-1582143IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.9E-6185259No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-13239299No hitNo description
PfamPF001701.5E-15240301IPR004827Basic-leucine zipper domain
SMARTSM003381.9E-12240304IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.013242305IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-9244298No hitNo description
CDDcd147027.36E-17245293No hitNo description
PROSITE patternPS000360247262IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MVFNCRPPVV ITGEVTLCHF KSRIGINSVK DLQSNLSDSP KHKGKSGVYY ELLQQFTSLF  60
WNSTMGSSED MKSPKSAKVS PSNQAYYGPG VPVPPSYLNP AVMAGHVPHP HLWSPPQTLM  120
PSYGVPYSTI YSPGVVYAHP AVPLDDSQET TLFSANMMSY PAVTVIQVAA PVSTQQLSNS  180
SDITDQGLRK KLKSVDGVAM RDVKNNVDVD GEGLVHEASQ SAECGIRASS NASDCNYGDQ  240
RQQKQERRKQ ANRESAKRSR LRKQAETEEL MERYETLKVE NIALKSEMNQ LKEGSEKLRV  300
ESAALMEKLN VADVTHKEEM VLDEIEPDLA QPNCGEDGVQ LNKSGSHFGI KERNPSSNPK  360
FRTRDKLVAY RKGMA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187193LRKKLKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PHV31e-173A0A2R6PHV3_ACTCH; G-box-binding factor like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1889723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.27e-24G-box binding factor 3