PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn177531
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 429aa    MW: 47681 Da    PI: 7.1775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn177531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-1878128256
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Achn177531  78 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 128
                 689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.7E-2878135IPR001471AP2/ERF domain
PROSITE profilePS5103220.29778135IPR001471AP2/ERF domain
SMARTSM003801.3E-3578141IPR001471AP2/ERF domain
PfamPF008473.4E-1278127IPR001471AP2/ERF domain
CDDcd000183.01E-1678135No hitNo description
PRINTSPR003671.6E-77990IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-1979135IPR016177DNA-binding domain
PRINTSPR003671.6E-7101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MVMTDGVWWW DLGCIFLSLY RHRQFHNLFQ MQKRLVVAGG GIDKMVRAPP PPSGSSTSGN  60
GHEGVRSRRK TSSRGYHRFV GVRQRPSGRW VAEIKDSLQK VRLWLGTFDT AEDAARAYDD  120
AARALRGANT RTNFELPPQS ESNSCRGNYN TSVPENAEPF SFEEVCGTEE ADGLLGALKA  180
KLLDGKSNLR PPLVQVNHLP VQSNFVVACL HNKDNNSTSS TTKGESSSSK PYVNPLMTVD  240
PTRVINVNPN NNLGNNMTCF RLDHNHTNEQ DYMGVVSTGD HQIGMQWQNY SHSTTVSTSI  300
WPREPAAKEF SPWNSQMNHI HARDLQEDRG LFGRWPLLRH TETTSTDQAT VDLSYSRNCC  360
TEDQVSNSNN RKVGDMTICM PMSVSQNDVM GGVWASDQQI VHCDNNTNWG SGANASWDPL  420
LYVSSVLG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021296118.12e-77ethylene-responsive transcription factor ERF024-like
TrEMBLA0A2R6PIC80.0A0A2R6PIC8_ACTCH; Ethylene-responsive transcription factor RAP2-11 like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118691819
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-16related to AP2 11