PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn173651

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bZIP

Protein Properties

Length: 430aa MW: 47475.9 Da PI: 9.6704

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn173651	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.4e-15	270	312	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk Achn173651 270 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLKR 312 79**************************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-13	266	332	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	268	313	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.8E-12	270	312	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.94E-11	270	313	No hit	No description
CDD	cd14707	5.27E-24	270	315	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.7E-15	270	313	No hit	No description
PROSITE pattern	PS00036	0	273	288	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence Send to blast
MGSQGGGGGS SSGRSQEQIK SHALLGRQGS LYSLTLDEVE HQLGDLGKPL SSMNLDELLK 60 SVWGAEANQG IGIGIGMGLG MCGVDSQQIG GQVSPSTLGR DLSKKTVDEV WQDIIQQGHN 120 NKTNILNDRK AQERQPTLGE MTLEDFLVKA GVVAESSSSP GIPKKNSNSG SVLGVGDDQI 180 TLPSQQAGAQ WMHYQQQQQQ NMLTVFMPPG HPPVQQALPI VSNPIMDAAA YPETHMNMSP 240 SPLMGTPSDT QTPGRKRVAP GDVIEKTVER RQKRMIKNRE SAARSRARKQ AYTHELENKV 300 SRLEEENERL KRQKVYSIYS YRLALLSYQL SKNCLILSFM FSDVILDVIM KVQEPTQETQ 360 KHHCRSQTPT LKPRQSTIWL EVTRSGLPMS YPNRKKIDPI DLVRNQRATI VDTPLTLRRP 420 ETSKNSKSD*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence Send to blast

MGSQGGGGGS SSGRSQEQIK SHALLGRQGS LYSLTLDEVE HQLGDLGKPL SSMNLDELLK  60
SVWGAEANQG IGIGIGMGLG MCGVDSQQIG GQVSPSTLGR DLSKKTVDEV WQDIIQQGHN  120
NKTNILNDRK AQERQPTLGE MTLEDFLVKA GVVAESSSSP GIPKKNSNSG SVLGVGDDQI  180
TLPSQQAGAQ WMHYQQQQQQ NMLTVFMPPG HPPVQQALPI VSNPIMDAAA YPETHMNMSP  240
SPLMGTPSDT QTPGRKRVAP GDVIEKTVER RQKRMIKNRE SAARSRARKQ AYTHELENKV  300
SRLEEENERL KRQKVYSIYS YRLALLSYQL SKNCLILSFM FSDVILDVIM KVQEPTQETQ  360
KHHCRSQTPT LKPRQSTIWL EVTRSGLPMS YPNRKKIDPI DLVRNQRATI VDTPLTLRRP  420
ETSKNSKSD*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KC215406	1e-92	KC215406.1 Camellia sinensis bZIP transcription factor bZIP7 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028089879.1	1e-127	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028089880.1	1e-127	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_028089881.1	1e-127	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-75	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2R6Q4C4	0.0	A0A2R6Q4C4_ACTCH; ABSCISIC ACID-INSENSITIVE 5-like protein
STRING	PGSC0003DMT400072260	1e-112	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-73	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]