PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn159401
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 123aa    MW: 13517.9 Da    PI: 5.2633
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn159401genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.3e-142441055
         AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +k+g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  Achn159401  2 RKWGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFCLRG 44
                46**********9...336*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.0E-25153IPR001471AP2/ERF domain
CDDcd000188.39E-24153No hitNo description
PROSITE profilePS5103219.164152IPR001471AP2/ERF domain
SMARTSM003801.3E-28158IPR001471AP2/ERF domain
PfamPF008474.1E-8244IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-18253IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MRKWGKWVAE IREPNKRSRI WLGSYSSPVA AARAYDTAVF CLRGPSARLN FPEYITEEDD  60
LRDGGGADMS SASIRKKATE VGARVDALET AHHHGPAESN SARVSVKPDL NEYPDPENSD  120
EE*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019082291.18e-60PREDICTED: ethylene-responsive transcription factor ERF011-like
SwissprotQ8LC301e-43RAP21_ARATH; Ethylene-responsive transcription factor RAP2-1
TrEMBLA0A2R6RN781e-84A0A2R6RN78_ACTCH; Ethylene-responsive transcription factor RAP2-10 like
STRINGVIT_18s0001g10150.t015e-60(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9432390
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.15e-46related to AP2 1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]