PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn154221
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family S1Fa-like
Protein Properties Length: 375aa    MW: 41363 Da    PI: 9.6483
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn154221genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA118.82e-37310374670
        S1FA   6 veakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 
                  e+kG+nPGlivll+vggl+l+flvgny+ly+yaqk+lPP+kkk +skkk+k+e+lkqGv++PGe
  Achn154221 310 PEVKGFNPGLIVLLLVGGLILTFLVGNYLLYMYAQKTLPPKKKKLISKKKMKKERLKQGVSAPGE 374
                 699*************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF030945.7E-2240108IPR004326Mlo-related protein
PfamPF030941.3E-21176259IPR004326Mlo-related protein
PfamPF046891.0E-36311374IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MGSIGGGGVL ILAEVGEVLG VLGGRGRPLG KRERWVLDLK WLKSHRKTAL YDAVDRLKSE  60
LMLLGFMSLI LAVTQKSISR ICIPNRLADI MLPCRKEAET ETATVEHLQH LVVGFIGKLL  120
PAAANGVYNG SLWMVAHRRL ADDVDEAADD GSSTATDSCS KRSSYVVHSR YLHACQCSRV  180
SVQVICSYIT LPLYALVTQM GSEFKSKVLE EQVSGIIKQW HTEVRQRRRK QEQITLVSPR  240
TSLSTEWSLR SSPTDLSSHH RPTPMLTDQG KNIIAGGGEI TEEQDEKTNE VAGSSWIPYQ  300
EGTENVIKDP EVKGFNPGLI VLLLVGGLIL TFLVGNYLLY MYAQKTLPPK KKKLISKKKM  360
KKERLKQGVS APGE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225230QRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6R8442e-77A0A2R6R844_ACTCH; MLO-like protein
STRINGXP_008239391.12e-27(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31742249