PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn112911 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23358.7 Da PI: 7.7718 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.9 | 6.8e-10 | 69 | 94 | 27 | 52 |
AP2 27 krkrfslgkfgtaeeAakaaiaarkk 52 +++r++lg+f taeeAa+a+++a+ Achn112911 69 RKRRVWLGTFETAEEAARAYDEAAVL 94 35*********************965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.829 | 34 | 105 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.3E-13 | 58 | 111 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.52E-19 | 64 | 107 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.0E-18 | 68 | 105 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.0E-6 | 69 | 92 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.53E-12 | 69 | 106 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MHNYSSQLQL HILTKDSIKL STDCYSRGNP GPVDYRGLFR DEEVNTCADV LANMDANQTK 60 ELVILRDSRK RRVWLGTFET AEEAARAYDE AAVLMCGRIA KTNFPIASVA NNNAAMSKSP 120 SAALSAKLRK CCKSPSPSMT CLRLDPENSR IGVWQKQAGV RPDSKWVMTV QLGKKNEELP 180 EKEVPVAVGD GLGEEERMAL QMIEELLNRN * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021298306.1 | 7e-60 | ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q9XI33 | 2e-47 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A2R6QFY1 | 7e-98 | A0A2R6QFY1_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | XP_008792041.1 | 6e-58 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 3e-35 | ERF family protein |