PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn106561
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 307aa    MW: 33864.7 Da    PI: 4.5777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn106561genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.81.3e-08109145747
         AP2   7 rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 
                 r++k r rW+Ae rdp+    + kr +lg+f  +eeA +a +
  Achn106561 109 RQRK-RDRWAAETRDPV----SgKRLWLGTFNLPEEASEAIE 145
                 5566.89********64....45**************99965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381234.8E-259286IPR017392AP2/ERF transcription factor ERF/PTI6
PROSITE profilePS5103212.57699165IPR001471AP2/ERF domain
CDDcd000185.65E-11103162No hitNo description
SuperFamilySSF541719.15E-9108151IPR016177DNA-binding domain
SMARTSM003802.7E-4108171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-12109162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MPEPPPNQRN ICKKPKKKTV SAEENTRKMK KKIRLIFSDP DATESSDDER SGFEPKRIVR  60
EINLPLAILN LPKAPESENS CQDSNNGENP SHRKRVSPKF PSSKIPDFRQ RKRDRWAAET  120
RDPVSGKRLW LGTFNLPEEA SEAIERKKIE FAAMAGDKSC YNSFSVAVSE NSKTSSHASP  180
PCVLESDSVA SQSYTKCDET VKDADADTNL GEKKGIDAGA DTNLGEKKGI DSVELDLGME  240
LDSLFVGDFD NVLGDFCGLD DLQLCGFEDV EQIDLPDFNF ELGSEEFAWI GEAINIACTS  300
FAASRN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028083481.11e-71ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2R6QQN80.0A0A2R6QQN8_ACTCH; Ethylene-responsive transcription factor
STRINGXP_010681556.12e-50(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-29ERF family protein