PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn106561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 307aa MW: 33864.7 Da PI: 4.5777 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.8 | 1.3e-08 | 109 | 145 | 7 | 47 |
AP2 7 rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 r++k r rW+Ae rdp+ + kr +lg+f +eeA +a + Achn106561 109 RQRK-RDRWAAETRDPV----SgKRLWLGTFNLPEEASEAIE 145 5566.89********64....45**************99965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 4.8E-25 | 9 | 286 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
PROSITE profile | PS51032 | 12.576 | 99 | 165 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.65E-11 | 103 | 162 | No hit | No description |
SuperFamily | SSF54171 | 9.15E-9 | 108 | 151 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.7E-4 | 108 | 171 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.7E-12 | 109 | 162 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MPEPPPNQRN ICKKPKKKTV SAEENTRKMK KKIRLIFSDP DATESSDDER SGFEPKRIVR 60 EINLPLAILN LPKAPESENS CQDSNNGENP SHRKRVSPKF PSSKIPDFRQ RKRDRWAAET 120 RDPVSGKRLW LGTFNLPEEA SEAIERKKIE FAAMAGDKSC YNSFSVAVSE NSKTSSHASP 180 PCVLESDSVA SQSYTKCDET VKDADADTNL GEKKGIDAGA DTNLGEKKGI DSVELDLGME 240 LDSLFVGDFD NVLGDFCGLD DLQLCGFEDV EQIDLPDFNF ELGSEEFAWI GEAINIACTS 300 FAASRN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028083481.1 | 1e-71 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2R6QQN8 | 0.0 | A0A2R6QQN8_ACTCH; Ethylene-responsive transcription factor | ||||
STRING | XP_010681556.1 | 2e-50 | (Beta vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2957 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 4e-29 | ERF family protein |