PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn096211
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 305aa    MW: 32525.9 Da    PI: 9.2949
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn096211genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-07261288635
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TT CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskaps 35 
                 +++Er RR riN ++ +L+el+P++  +++
  Achn096211 261 SIAERDRRTRINGKLKKLQELVPNL--EKK 288
                 689*********************6..243 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.42255304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-6258289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.59E-5259290No hitNo description
Gene3DG3DSA:4.10.280.107.4E-6260286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-5261287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGPSGLIRYG SAPGSFLATA VDSVVGRHTR DFSALGSSSP HLLRHFSAAE TSSNTSDPQN  60
PNKPQTAPFG SNDIAFGEFS TDRINLNSKS SGGGGSLLRQ SSSPAGFLNH LASSATAASN  120
GFPATRGIGS YNSREALDNG HGISRLASQL SFTRQDSLSQ ISEESENGHK KSAHSYATAS  180
FGSVSWDDSN VIVFSASPSK RAKTIGGGDA RCLNTVESQF QFSLSETDLE MATTENLLQI  240
PQDSVACKIR AKRGFATHPR SIAERDRRTR INGKLKKLQE LVPNLEKKLK NELEHCTCRC  300
KETT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028106226.11e-105transcription factor bHLH128
TrEMBLA0A2R6R8W90.0A0A2R6R8W9_ACTCH; Transcription factor bHLH128 like
STRINGcassava4.1_010829m5e-92(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64552328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-57bHLH family protein