PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn091991 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | G2-like | ||||||||
Protein Properties | Length: 331aa MW: 36895.7 Da PI: 8.0179 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 36 | 1.6e-11 | 192 | 216 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 pr+rWt++LH+rFv+ave LGG+e+ Achn091991 192 PRMRWTTTLHSRFVHAVELLGGHER 216 9*********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.6E-8 | 190 | 216 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MELFPPQPDL SLQISPPNAK PTSAGGGGWR RAVVDHQQDM DLGFWKRALD STNRNSHSVS 60 NSMADTTACF ELSLSNPRSS NPNPNPNPNH FHLGLHNTNH FHQNHYTHHH EQPPPSNGLT 120 GLSRELGFLR PIRGIPVYQN PPFPFCQQAT VDSRASNSNL STTSASSPSA LISQSRPRFF 180 SRFPGKRSMR APRMRWTTTL HSRFVHAVEL LGGHERQSEV YENGSSGDTC EDMMFDIQNQ 240 RKSELSSINQ QDRTNLHQDK SYQGLWINSS REAWLHGTPR EYGGNMASPE KDMDPKCLSC 300 ERVSDVSSSN ISEGSPKKPN LEFTLGTPHS * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010663135.1 | 1e-114 | PREDICTED: probable transcription factor KAN2 isoform X2 | ||||
TrEMBL | A0A2R6Q390 | 0.0 | A0A2R6Q390_ACTCH; Transcription factor KAN2 | ||||
STRING | VIT_02s0012g01940.t01 | 1e-113 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2738 | 22 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 2e-34 | G2-like family protein |