PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn091741
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 193aa    MW: 20205.4 Da    PI: 5.2443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn091741genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-182979155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  Achn091741 29 PVYRGVRRRN-SGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALRG 79
                68*****888.8*********9.....4489************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-112979IPR001471AP2/ERF domain
PROSITE profilePS5103222.9853087IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-303089IPR001471AP2/ERF domain
SMARTSM003802.4E-333093IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-213089IPR016177DNA-binding domain
PRINTSPR003673.8E-83142IPR001471AP2/ERF domain
CDDcd000182.82E-293189No hitNo description
PRINTSPR003673.8E-85369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MDYSSGGGGP SGRGGNVAAG DARGSGRHPV YRGVRRRNSG KWVSEIREPR SPNRIWLGTF  60
PTPEMAAVAY DVAALALRGR DTELNFPNSA SSLPVPMSTA PRDIQEAAAS AAAAAGAATD  120
ALAGWTQVHM NENANRSGGG SEFVDEDLIF DMPNVLVNMA EGMLLSPPRL NVAGDHDTAA  180
EYAGDHNLWK FP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-142389674Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021655859.14e-76ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR08e-56ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2R6Q3V71e-136A0A2R6Q3V7_ACTCH; Ethylene-responsive transcription factor
STRINGcassava4.1_031718m4e-75(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-46ERF family protein