PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn065941
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 141aa    MW: 15717 Da    PI: 7.0281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn065941genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.63.7e-097322853
         AP2 28 rkrfslgkfgtaeeAakaaiaarkkl 53
                ++r++lg+f tae+Aa+a+++a++ +
  Achn065941  7 KTRIWLGTFETAEDAARAYDEAARLM 32
                58********************9866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.154142IPR001471AP2/ERF domain
SMARTSM003808.1E-11248IPR001471AP2/ERF domain
PfamPF008472.3E-5534IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.4E-18642IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-11743IPR016177DNA-binding domain
CDDcd000183.71E-18744No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MIKRTMKTRI WLGTFETAED AARAYDEAAR LMCGLRAQTN FAYNPNWSQS SSSKLLSANL  60
TAKLHKCYVA SLQLTKQMEK EPHKVLGPQV VAHTSPPAVQ KANWVPQFRP LEEDHVEEMI  120
EELLDCGSIE ICPNVPPHGV *
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265679.14e-55PREDICTED: ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW52e-44ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A2R6QMN92e-86A0A2R6QMN9_ACTCH; Ethylene-responsive transcription factor
STRINGXP_010265679.12e-54(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.15e-26ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]