PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn064481 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | ERF | ||||||||
Protein Properties | Length: 296aa MW: 33678 Da PI: 6.5337 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.4 | 8.4e-19 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ ++k++g Achn064481 85 QYRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNTAEEAARAYDSEARKIRG 134 69*******.**********954...3************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 4.18E-22 | 85 | 143 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-32 | 85 | 143 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.1E-37 | 85 | 148 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.881 | 85 | 142 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.12E-32 | 85 | 143 | No hit | No description |
Pfam | PF00847 | 1.8E-11 | 86 | 134 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-11 | 86 | 97 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-11 | 108 | 124 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MCGGAILTYF IPRRVSASPL WPDSPFATKF NPKDQQPTFK RPQPNTGNSL RRIYICVCCF 60 FLTEDFLRTG DGQVENTVKR QRKNQYRGIR QRPWGKWAAE IRDPRKGIRV WLGTFNTAEE 120 AARAYDSEAR KIRGKKAKVN FPNEIHDYVS PTTMPSPNLP LKQTHIEFGE NLNQFGACNA 180 WFCSVPLSES EIAYSSMGCD QNEVKVEEKK IDVRENCQKK ALIEVREREE VQDEETEVKK 240 LSEELMAYES FMKFYQIPYL DGQSAAAPPN SAPEKVDGAA AVELWSFDDV TPNGE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-21 | 84 | 144 | 13 | 74 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028069380.1 | 9e-93 | ethylene-responsive transcription factor ERF073-like | ||||
Refseq | XP_028069381.1 | 9e-93 | ethylene-responsive transcription factor ERF073-like | ||||
TrEMBL | A0A2R6PDR3 | 0.0 | A0A2R6PDR3_ACTCH; Ethylene-responsive transcription factor RAP2-3 like | ||||
STRING | XP_009378746.1 | 4e-78 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7118 | 23 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 7e-35 | ethylene-responsive element binding protein |