PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn064481
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 296aa    MW: 33678 Da    PI: 6.5337
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn064481genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-1985134255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  ++k++g
  Achn064481  85 QYRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNTAEEAARAYDSEARKIRG 134
                 69*******.**********954...3************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.18E-2285143IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-3285143IPR001471AP2/ERF domain
SMARTSM003804.1E-3785148IPR001471AP2/ERF domain
PROSITE profilePS5103223.88185142IPR001471AP2/ERF domain
CDDcd000181.12E-3285143No hitNo description
PfamPF008471.8E-1186134IPR001471AP2/ERF domain
PRINTSPR003671.0E-118697IPR001471AP2/ERF domain
PRINTSPR003671.0E-11108124IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MCGGAILTYF IPRRVSASPL WPDSPFATKF NPKDQQPTFK RPQPNTGNSL RRIYICVCCF  60
FLTEDFLRTG DGQVENTVKR QRKNQYRGIR QRPWGKWAAE IRDPRKGIRV WLGTFNTAEE  120
AARAYDSEAR KIRGKKAKVN FPNEIHDYVS PTTMPSPNLP LKQTHIEFGE NLNQFGACNA  180
WFCSVPLSES EIAYSSMGCD QNEVKVEEKK IDVRENCQKK ALIEVREREE VQDEETEVKK  240
LSEELMAYES FMKFYQIPYL DGQSAAAPPN SAPEKVDGAA AVELWSFDDV TPNGE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-21841441374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028069380.19e-93ethylene-responsive transcription factor ERF073-like
RefseqXP_028069381.19e-93ethylene-responsive transcription factor ERF073-like
TrEMBLA0A2R6PDR30.0A0A2R6PDR3_ACTCH; Ethylene-responsive transcription factor RAP2-3 like
STRINGXP_009378746.14e-78(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71182329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.17e-35ethylene-responsive element binding protein