PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn041981
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 319aa    MW: 35065.1 Da    PI: 7.4212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn041981genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.5e-174695255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae Aa a++ a+++++g
  Achn041981 46 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEAAACAYDCAALSMRG 95
                59*******.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.14E-1846104No hitNo description
PfamPF008471.2E-104695IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2946103IPR001471AP2/ERF domain
PROSITE profilePS5103222.89346103IPR001471AP2/ERF domain
SMARTSM003804.2E-3346109IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2146104IPR016177DNA-binding domain
PRINTSPR003675.0E-94758IPR001471AP2/ERF domain
PRINTSPR003675.0E-96985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MEAALKRLND SLTRQPESGP LQPLKRVTTA ANKSSLRDGG CGTQMRYRGV RRRPWGRYAA  60
EIRDPQSKER RWLGTFDTAE AAACAYDCAA LSMRGVKART NFAYPTATSP TPPPSLTDNF  120
LPPFHYKKRS QPSVRDIPTP TRGFISPVSI PSGDFPVQAP QRSTSLNTVV FPHVFKPSLA  180
YEPFPNVSLS TSVCVHTSEN FPGSNQIRPK YEDLKSGQSD DGLDFFGSKP SDSGLLQEVL  240
NGFYPKPASK CDESSTQNQN CTHEAFDEMK GIESDHFDLY LDGFGSPAVA PANFTAPAES  300
NFSDVFQFEE LVNSRLFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1940102771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028114602.18e-91ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2R6P3F50.0A0A2R6P3F5_ACTCH; Ethylene-responsive transcription factor
STRINGVIT_00s0291g00030.t015e-59(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.17e-17DORNROSCHEN-like