PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn040871
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 273aa    MW: 29902.2 Da    PI: 7.9252
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn040871genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.99e-1869122356
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                 + kr+rr+ +NRe+ArrsR+RK+a + eLe+kv +L+ eN++L ++l  ++ ++
  Achn040871  69 DAKRARRMLSNRESARRSRRRKQAHVTELETKVSQLQVENSSLLERLTDISHKY 122
                 68******************************************9998877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-1364121No hitNo description
SMARTSM003384.5E-1967131IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.70269124IPR004827Basic-leucine zipper domain
PfamPF001709.2E-1670122IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-1271121No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
PfamPF124986.4E-46138261IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MTIVGSESYL QKEQDKDAGG PLAIPSWQAM QKKSGAQARS TTSGSSREQS DDDEAEGETE  60
MMQNTDPSDA KRARRMLSNR ESARRSRRRK QAHVTELETK VSQLQVENSS LLERLTDISH  120
KYNEAAVDYR VLKADVETLR AKVKMAEETV KRVTGLNPLF QVMSEVSTIG LPSFAGSPSD  180
TSADAAVPVQ DDPKQHFYQS PSHIHMSTHD PRIQNGFVDM PLADNTQQNP ATVAGNKMGR  240
TASMQRVASL ENLQKRIRGG ASSRGTQGNG EQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18390RRSRRRKQ
28590SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229152.11e-136PREDICTED: light-inducible protein CPRF2
SwissprotQ990902e-99CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2R6S0I40.0A0A2R6S0I4_ACTCH; Light-inducible protein
STRINGXP_009787496.11e-135(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.11e-48bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]